Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02095 and MPMX26_02096 are separated by 255 nucleotides MPMX26_02096 and MPMX26_02097 are separated by 221 nucleotides MPMX26_02097 and MPMX26_02098 overlap by 1 nucleotides
MPMX26_02095: MPMX26_02095 - hypothetical protein, at 2,151,514 to 2,151,876
_02095
MPMX26_02096: MPMX26_02096 - hypothetical protein, at 2,152,132 to 2,152,488
_02096
MPMX26_02097: MPMX26_02097 - hypothetical protein, at 2,152,710 to 2,152,967
_02097
MPMX26_02098: MPMX26_02098 - hypothetical protein, at 2,152,967 to 2,153,785
_02098
Position (kb)
2152
2153 Strain fitness (log2 ratio)
-1
0
1 at 2152.296 kb on + strand, within MPMX26_02096 at 2152.366 kb on + strand, within MPMX26_02096 at 2152.366 kb on + strand, within MPMX26_02096 at 2152.366 kb on + strand, within MPMX26_02096 at 2152.416 kb on + strand, within MPMX26_02096 at 2152.416 kb on + strand, within MPMX26_02096 at 2152.416 kb on + strand, within MPMX26_02096 at 2152.416 kb on + strand, within MPMX26_02096 at 2152.416 kb on + strand, within MPMX26_02096 at 2152.426 kb on + strand, within MPMX26_02096 at 2152.443 kb on + strand, within MPMX26_02096 at 2152.464 kb on + strand at 2152.693 kb on - strand at 2152.693 kb on - strand at 2152.693 kb on - strand at 2152.693 kb on - strand at 2152.693 kb on - strand at 2152.693 kb on - strand at 2152.695 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,152,296 + MPMX26_02096 0.46 -0.3 2,152,366 + MPMX26_02096 0.66 +0.1 2,152,366 + MPMX26_02096 0.66 -0.9 2,152,366 + MPMX26_02096 0.66 +0.7 2,152,416 + MPMX26_02096 0.80 -0.2 2,152,416 + MPMX26_02096 0.80 -0.7 2,152,416 + MPMX26_02096 0.80 -0.6 2,152,416 + MPMX26_02096 0.80 +0.0 2,152,416 + MPMX26_02096 0.80 -0.1 2,152,426 + MPMX26_02096 0.82 -0.6 2,152,443 + MPMX26_02096 0.87 -0.1 2,152,464 + +0.2 2,152,693 - -0.7 2,152,693 - +1.5 2,152,693 - +0.6 2,152,693 - +0.3 2,152,693 - +1.4 2,152,693 - -0.5 2,152,695 - +0.2
Or see this region's nucleotide sequence