Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01763

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01761 and MPMX26_01762 are separated by 41 nucleotidesMPMX26_01762 and MPMX26_01763 are separated by 51 nucleotidesMPMX26_01763 and MPMX26_01764 are separated by 48 nucleotides MPMX26_01761: MPMX26_01761 - hypothetical protein, at 1,819,829 to 1,820,992 _01761 MPMX26_01762: MPMX26_01762 - Hydroxyethylthiazole kinase, at 1,821,034 to 1,821,864 _01762 MPMX26_01763: MPMX26_01763 - hypothetical protein, at 1,821,916 to 1,822,284 _01763 MPMX26_01764: MPMX26_01764 - ATP-dependent RecD-like DNA helicase, at 1,822,333 to 1,824,060 _01764 Position (kb) 1821 1822 1823Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1820.933 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1820.947 kb on + strandat 1821.072 kb on + strandat 1821.103 kb on + strandat 1821.103 kb on + strandat 1821.144 kb on + strand, within MPMX26_01762at 1821.144 kb on + strand, within MPMX26_01762at 1821.177 kb on + strand, within MPMX26_01762at 1821.186 kb on + strand, within MPMX26_01762at 1821.250 kb on + strand, within MPMX26_01762at 1821.266 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.276 kb on + strand, within MPMX26_01762at 1821.282 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.331 kb on + strand, within MPMX26_01762at 1821.339 kb on + strand, within MPMX26_01762at 1821.339 kb on + strand, within MPMX26_01762at 1821.358 kb on + strand, within MPMX26_01762at 1821.369 kb on + strand, within MPMX26_01762at 1821.400 kb on + strand, within MPMX26_01762at 1821.420 kb on + strand, within MPMX26_01762at 1821.430 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.465 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.472 kb on + strand, within MPMX26_01762at 1821.484 kb on + strand, within MPMX26_01762at 1821.484 kb on + strand, within MPMX26_01762at 1821.486 kb on + strand, within MPMX26_01762at 1821.513 kb on + strand, within MPMX26_01762at 1821.513 kb on + strand, within MPMX26_01762at 1821.540 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.603 kb on + strand, within MPMX26_01762at 1821.633 kb on + strand, within MPMX26_01762at 1821.640 kb on + strand, within MPMX26_01762at 1821.666 kb on + strand, within MPMX26_01762at 1821.673 kb on + strand, within MPMX26_01762at 1821.691 kb on + strand, within MPMX26_01762at 1821.930 kb on - strandat 1821.974 kb on - strand, within MPMX26_01763at 1821.974 kb on - strand, within MPMX26_01763at 1822.015 kb on - strand, within MPMX26_01763at 1822.041 kb on - strand, within MPMX26_01763at 1822.041 kb on - strand, within MPMX26_01763at 1822.041 kb on - strand, within MPMX26_01763at 1822.041 kb on - strand, within MPMX26_01763at 1822.041 kb on - strand, within MPMX26_01763at 1822.060 kb on - strand, within MPMX26_01763at 1822.084 kb on - strand, within MPMX26_01763at 1822.084 kb on - strand, within MPMX26_01763at 1822.084 kb on - strand, within MPMX26_01763at 1822.161 kb on - strand, within MPMX26_01763at 1822.191 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.245 kb on - strand, within MPMX26_01763at 1822.348 kb on - strandat 1822.381 kb on - strandat 1822.471 kb on - strandat 1822.543 kb on - strand, within MPMX26_01764at 1822.548 kb on - strand, within MPMX26_01764at 1822.555 kb on - strand, within MPMX26_01764at 1822.557 kb on - strand, within MPMX26_01764at 1822.639 kb on - strand, within MPMX26_01764at 1822.639 kb on - strand, within MPMX26_01764at 1822.759 kb on - strand, within MPMX26_01764at 1822.759 kb on - strand, within MPMX26_01764at 1822.773 kb on - strand, within MPMX26_01764at 1822.774 kb on - strand, within MPMX26_01764at 1822.854 kb on - strand, within MPMX26_01764at 1822.854 kb on - strand, within MPMX26_01764at 1822.854 kb on - strand, within MPMX26_01764at 1822.859 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.932 kb on - strand, within MPMX26_01764at 1822.933 kb on - strand, within MPMX26_01764at 1823.014 kb on - strand, within MPMX26_01764at 1823.014 kb on - strand, within MPMX26_01764at 1823.019 kb on - strand, within MPMX26_01764at 1823.085 kb on - strand, within MPMX26_01764at 1823.105 kb on - strand, within MPMX26_01764at 1823.139 kb on - strand, within MPMX26_01764at 1823.145 kb on - strand, within MPMX26_01764at 1823.194 kb on - strand, within MPMX26_01764at 1823.194 kb on - strand, within MPMX26_01764at 1823.199 kb on - strand, within MPMX26_01764at 1823.226 kb on - strand, within MPMX26_01764at 1823.226 kb on - strand, within MPMX26_01764

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,820,933 + -0.0
1,820,947 + +2.5
1,820,947 + -0.9
1,820,947 + +1.7
1,820,947 + +2.1
1,820,947 + +2.3
1,820,947 + +0.5
1,820,947 + -0.6
1,820,947 + +0.2
1,821,072 + +0.2
1,821,103 + -1.7
1,821,103 + -1.1
1,821,144 + MPMX26_01762 0.13 +1.5
1,821,144 + MPMX26_01762 0.13 +0.3
1,821,177 + MPMX26_01762 0.17 -0.1
1,821,186 + MPMX26_01762 0.18 -0.8
1,821,250 + MPMX26_01762 0.26 -1.8
1,821,266 + MPMX26_01762 0.28 +0.0
1,821,276 + MPMX26_01762 0.29 -1.3
1,821,276 + MPMX26_01762 0.29 -0.8
1,821,276 + MPMX26_01762 0.29 -0.7
1,821,282 + MPMX26_01762 0.30 -1.0
1,821,331 + MPMX26_01762 0.36 -0.9
1,821,331 + MPMX26_01762 0.36 -3.0
1,821,331 + MPMX26_01762 0.36 -0.9
1,821,331 + MPMX26_01762 0.36 -0.6
1,821,331 + MPMX26_01762 0.36 -1.4
1,821,339 + MPMX26_01762 0.37 -0.5
1,821,339 + MPMX26_01762 0.37 -1.8
1,821,358 + MPMX26_01762 0.39 -1.5
1,821,369 + MPMX26_01762 0.40 +0.4
1,821,400 + MPMX26_01762 0.44 -2.1
1,821,420 + MPMX26_01762 0.46 -1.1
1,821,430 + MPMX26_01762 0.48 -2.7
1,821,465 + MPMX26_01762 0.52 +0.1
1,821,465 + MPMX26_01762 0.52 -0.7
1,821,465 + MPMX26_01762 0.52 -0.6
1,821,465 + MPMX26_01762 0.52 -0.6
1,821,472 + MPMX26_01762 0.53 -0.5
1,821,472 + MPMX26_01762 0.53 -0.4
1,821,472 + MPMX26_01762 0.53 -0.3
1,821,472 + MPMX26_01762 0.53 -1.6
1,821,472 + MPMX26_01762 0.53 -0.5
1,821,472 + MPMX26_01762 0.53 -1.0
1,821,472 + MPMX26_01762 0.53 +0.1
1,821,472 + MPMX26_01762 0.53 -1.1
1,821,472 + MPMX26_01762 0.53 -1.6
1,821,472 + MPMX26_01762 0.53 -1.0
1,821,472 + MPMX26_01762 0.53 -0.5
1,821,484 + MPMX26_01762 0.54 -1.0
1,821,484 + MPMX26_01762 0.54 -0.0
1,821,486 + MPMX26_01762 0.54 -0.7
1,821,513 + MPMX26_01762 0.58 -1.4
1,821,513 + MPMX26_01762 0.58 +1.0
1,821,540 + MPMX26_01762 0.61 -1.5
1,821,603 + MPMX26_01762 0.68 -1.0
1,821,603 + MPMX26_01762 0.68 +0.2
1,821,603 + MPMX26_01762 0.68 -1.0
1,821,603 + MPMX26_01762 0.68 -0.5
1,821,603 + MPMX26_01762 0.68 -1.2
1,821,603 + MPMX26_01762 0.68 +0.1
1,821,633 + MPMX26_01762 0.72 -1.3
1,821,640 + MPMX26_01762 0.73 -0.8
1,821,666 + MPMX26_01762 0.76 -0.8
1,821,673 + MPMX26_01762 0.77 -1.5
1,821,691 + MPMX26_01762 0.79 -2.1
1,821,930 - +0.1
1,821,974 - MPMX26_01763 0.16 +1.5
1,821,974 - MPMX26_01763 0.16 +0.5
1,822,015 - MPMX26_01763 0.27 -1.2
1,822,041 - MPMX26_01763 0.34 -0.1
1,822,041 - MPMX26_01763 0.34 -0.2
1,822,041 - MPMX26_01763 0.34 -1.1
1,822,041 - MPMX26_01763 0.34 -0.1
1,822,041 - MPMX26_01763 0.34 -0.5
1,822,060 - MPMX26_01763 0.39 -1.0
1,822,084 - MPMX26_01763 0.46 +0.5
1,822,084 - MPMX26_01763 0.46 +1.7
1,822,084 - MPMX26_01763 0.46 +0.1
1,822,161 - MPMX26_01763 0.66 +0.0
1,822,191 - MPMX26_01763 0.75 +1.0
1,822,245 - MPMX26_01763 0.89 -0.4
1,822,245 - MPMX26_01763 0.89 -0.1
1,822,245 - MPMX26_01763 0.89 +0.2
1,822,245 - MPMX26_01763 0.89 -0.4
1,822,245 - MPMX26_01763 0.89 -1.7
1,822,245 - MPMX26_01763 0.89 +0.0
1,822,245 - MPMX26_01763 0.89 -0.8
1,822,245 - MPMX26_01763 0.89 -1.0
1,822,245 - MPMX26_01763 0.89 -0.3
1,822,245 - MPMX26_01763 0.89 -2.1
1,822,348 - -0.4
1,822,381 - +0.2
1,822,471 - -0.6
1,822,543 - MPMX26_01764 0.12 +0.4
1,822,548 - MPMX26_01764 0.12 +1.5
1,822,555 - MPMX26_01764 0.13 +0.5
1,822,557 - MPMX26_01764 0.13 -0.2
1,822,639 - MPMX26_01764 0.18 -0.2
1,822,639 - MPMX26_01764 0.18 +0.8
1,822,759 - MPMX26_01764 0.25 +0.7
1,822,759 - MPMX26_01764 0.25 -0.8
1,822,773 - MPMX26_01764 0.25 +0.5
1,822,774 - MPMX26_01764 0.26 -0.8
1,822,854 - MPMX26_01764 0.30 +1.1
1,822,854 - MPMX26_01764 0.30 -0.7
1,822,854 - MPMX26_01764 0.30 +0.0
1,822,859 - MPMX26_01764 0.30 +1.1
1,822,932 - MPMX26_01764 0.35 +0.4
1,822,932 - MPMX26_01764 0.35 +0.1
1,822,932 - MPMX26_01764 0.35 -1.5
1,822,932 - MPMX26_01764 0.35 -2.4
1,822,932 - MPMX26_01764 0.35 -0.1
1,822,932 - MPMX26_01764 0.35 -0.1
1,822,932 - MPMX26_01764 0.35 -1.5
1,822,932 - MPMX26_01764 0.35 -0.3
1,822,932 - MPMX26_01764 0.35 +0.6
1,822,933 - MPMX26_01764 0.35 +0.4
1,823,014 - MPMX26_01764 0.39 +0.1
1,823,014 - MPMX26_01764 0.39 -0.1
1,823,019 - MPMX26_01764 0.40 -2.4
1,823,085 - MPMX26_01764 0.44 -0.7
1,823,105 - MPMX26_01764 0.45 +1.9
1,823,139 - MPMX26_01764 0.47 +0.4
1,823,145 - MPMX26_01764 0.47 +0.3
1,823,194 - MPMX26_01764 0.50 +1.0
1,823,194 - MPMX26_01764 0.50 +0.0
1,823,199 - MPMX26_01764 0.50 +1.2
1,823,226 - MPMX26_01764 0.52 +0.2
1,823,226 - MPMX26_01764 0.52 -0.1

Or see this region's nucleotide sequence