Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01748

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01747 and MPMX26_01748 are separated by 84 nucleotidesMPMX26_01748 and MPMX26_01749 are separated by 136 nucleotides MPMX26_01747: MPMX26_01747 - hypothetical protein, at 1,803,593 to 1,804,855 _01747 MPMX26_01748: MPMX26_01748 - hypothetical protein, at 1,804,940 to 1,805,794 _01748 MPMX26_01749: MPMX26_01749 - hypothetical protein, at 1,805,931 to 1,807,322 _01749 Position (kb) 1804 1805 1806Strain fitness (log2 ratio) -2 -1 0 1at 1804.383 kb on + strand, within MPMX26_01747at 1805.017 kb on - strandat 1805.017 kb on - strandat 1805.017 kb on - strandat 1805.038 kb on - strand, within MPMX26_01748at 1805.038 kb on - strand, within MPMX26_01748at 1805.057 kb on - strand, within MPMX26_01748at 1805.099 kb on - strand, within MPMX26_01748at 1805.114 kb on - strand, within MPMX26_01748at 1805.126 kb on - strand, within MPMX26_01748at 1805.126 kb on - strand, within MPMX26_01748at 1805.132 kb on - strand, within MPMX26_01748at 1805.137 kb on - strand, within MPMX26_01748at 1805.153 kb on - strand, within MPMX26_01748at 1805.170 kb on - strand, within MPMX26_01748at 1805.182 kb on - strand, within MPMX26_01748at 1805.207 kb on - strand, within MPMX26_01748at 1805.207 kb on - strand, within MPMX26_01748at 1805.219 kb on - strand, within MPMX26_01748at 1805.219 kb on - strand, within MPMX26_01748at 1805.219 kb on - strand, within MPMX26_01748at 1805.224 kb on - strand, within MPMX26_01748at 1805.224 kb on - strand, within MPMX26_01748at 1805.224 kb on - strand, within MPMX26_01748at 1805.224 kb on - strand, within MPMX26_01748at 1805.384 kb on - strand, within MPMX26_01748at 1805.410 kb on - strand, within MPMX26_01748at 1805.410 kb on - strand, within MPMX26_01748at 1805.429 kb on - strand, within MPMX26_01748at 1805.447 kb on - strand, within MPMX26_01748at 1805.447 kb on - strand, within MPMX26_01748at 1805.458 kb on - strand, within MPMX26_01748at 1805.458 kb on - strand, within MPMX26_01748at 1805.488 kb on - strand, within MPMX26_01748at 1805.536 kb on - strand, within MPMX26_01748at 1805.536 kb on - strand, within MPMX26_01748at 1805.552 kb on - strand, within MPMX26_01748at 1805.605 kb on - strand, within MPMX26_01748at 1805.698 kb on - strand, within MPMX26_01748at 1805.714 kb on - strandat 1805.714 kb on - strandat 1805.984 kb on - strandat 1806.125 kb on - strand, within MPMX26_01749at 1806.207 kb on - strand, within MPMX26_01749at 1806.207 kb on - strand, within MPMX26_01749at 1806.207 kb on - strand, within MPMX26_01749at 1806.207 kb on - strand, within MPMX26_01749at 1806.333 kb on - strand, within MPMX26_01749at 1806.333 kb on - strand, within MPMX26_01749at 1806.333 kb on - strand, within MPMX26_01749at 1806.333 kb on - strand, within MPMX26_01749at 1806.362 kb on - strand, within MPMX26_01749at 1806.386 kb on - strand, within MPMX26_01749at 1806.393 kb on - strand, within MPMX26_01749at 1806.431 kb on - strand, within MPMX26_01749at 1806.431 kb on - strand, within MPMX26_01749at 1806.431 kb on - strand, within MPMX26_01749at 1806.440 kb on - strand, within MPMX26_01749at 1806.489 kb on - strand, within MPMX26_01749at 1806.536 kb on - strand, within MPMX26_01749at 1806.536 kb on - strand, within MPMX26_01749at 1806.536 kb on - strand, within MPMX26_01749at 1806.594 kb on - strand, within MPMX26_01749at 1806.666 kb on - strand, within MPMX26_01749at 1806.681 kb on - strand, within MPMX26_01749at 1806.696 kb on - strand, within MPMX26_01749at 1806.701 kb on - strand, within MPMX26_01749at 1806.725 kb on - strand, within MPMX26_01749at 1806.741 kb on - strand, within MPMX26_01749at 1806.755 kb on - strand, within MPMX26_01749at 1806.755 kb on - strand, within MPMX26_01749

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,804,383 + MPMX26_01747 0.63 -1.8
1,805,017 - +0.3
1,805,017 - +0.8
1,805,017 - -0.5
1,805,038 - MPMX26_01748 0.11 -0.7
1,805,038 - MPMX26_01748 0.11 +0.5
1,805,057 - MPMX26_01748 0.14 +0.8
1,805,099 - MPMX26_01748 0.19 -0.1
1,805,114 - MPMX26_01748 0.20 +0.3
1,805,126 - MPMX26_01748 0.22 -0.0
1,805,126 - MPMX26_01748 0.22 +0.4
1,805,132 - MPMX26_01748 0.22 +0.4
1,805,137 - MPMX26_01748 0.23 +0.3
1,805,153 - MPMX26_01748 0.25 -0.3
1,805,170 - MPMX26_01748 0.27 +0.5
1,805,182 - MPMX26_01748 0.28 +0.0
1,805,207 - MPMX26_01748 0.31 +1.1
1,805,207 - MPMX26_01748 0.31 -0.0
1,805,219 - MPMX26_01748 0.33 +0.8
1,805,219 - MPMX26_01748 0.33 -0.5
1,805,219 - MPMX26_01748 0.33 -0.5
1,805,224 - MPMX26_01748 0.33 +0.1
1,805,224 - MPMX26_01748 0.33 -0.8
1,805,224 - MPMX26_01748 0.33 +0.9
1,805,224 - MPMX26_01748 0.33 +0.4
1,805,384 - MPMX26_01748 0.52 +0.1
1,805,410 - MPMX26_01748 0.55 -1.4
1,805,410 - MPMX26_01748 0.55 -0.6
1,805,429 - MPMX26_01748 0.57 -0.3
1,805,447 - MPMX26_01748 0.59 +0.2
1,805,447 - MPMX26_01748 0.59 -0.2
1,805,458 - MPMX26_01748 0.61 -0.0
1,805,458 - MPMX26_01748 0.61 -1.0
1,805,488 - MPMX26_01748 0.64 -1.4
1,805,536 - MPMX26_01748 0.70 -0.2
1,805,536 - MPMX26_01748 0.70 -1.3
1,805,552 - MPMX26_01748 0.72 +0.1
1,805,605 - MPMX26_01748 0.78 +0.6
1,805,698 - MPMX26_01748 0.89 +0.4
1,805,714 - +0.8
1,805,714 - +0.5
1,805,984 - -0.5
1,806,125 - MPMX26_01749 0.14 -0.0
1,806,207 - MPMX26_01749 0.20 -0.9
1,806,207 - MPMX26_01749 0.20 -0.6
1,806,207 - MPMX26_01749 0.20 -1.6
1,806,207 - MPMX26_01749 0.20 +0.1
1,806,333 - MPMX26_01749 0.29 +0.4
1,806,333 - MPMX26_01749 0.29 -0.4
1,806,333 - MPMX26_01749 0.29 +0.5
1,806,333 - MPMX26_01749 0.29 +0.1
1,806,362 - MPMX26_01749 0.31 +0.1
1,806,386 - MPMX26_01749 0.33 -0.1
1,806,393 - MPMX26_01749 0.33 -0.3
1,806,431 - MPMX26_01749 0.36 -0.8
1,806,431 - MPMX26_01749 0.36 -1.2
1,806,431 - MPMX26_01749 0.36 +0.1
1,806,440 - MPMX26_01749 0.37 -0.0
1,806,489 - MPMX26_01749 0.40 -1.0
1,806,536 - MPMX26_01749 0.43 +0.8
1,806,536 - MPMX26_01749 0.43 +1.5
1,806,536 - MPMX26_01749 0.43 -0.6
1,806,594 - MPMX26_01749 0.48 -1.4
1,806,666 - MPMX26_01749 0.53 +1.4
1,806,681 - MPMX26_01749 0.54 +0.6
1,806,696 - MPMX26_01749 0.55 -0.1
1,806,701 - MPMX26_01749 0.55 +0.2
1,806,725 - MPMX26_01749 0.57 +0.7
1,806,741 - MPMX26_01749 0.58 -0.8
1,806,755 - MPMX26_01749 0.59 +1.1
1,806,755 - MPMX26_01749 0.59 +0.2

Or see this region's nucleotide sequence