Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01468 and MPMX26_01469 are separated by 432 nucleotides MPMX26_01469 and MPMX26_01470 are separated by 74 nucleotides MPMX26_01470 and MPMX26_01471 are separated by 97 nucleotides
MPMX26_01468: MPMX26_01468 - Sodium/proline symporter, at 1,520,953 to 1,522,443
_01468
MPMX26_01469: MPMX26_01469 - Aspartate ammonia-lyase, at 1,522,876 to 1,524,330
_01469
MPMX26_01470: MPMX26_01470 - hypothetical protein, at 1,524,405 to 1,524,845
_01470
MPMX26_01471: MPMX26_01471 - Cardiolipin synthase C, at 1,524,943 to 1,526,496
_01471
Position (kb)
1522
1523
1524
1525 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1521.949 kb on - strand, within MPMX26_01468 at 1521.954 kb on - strand, within MPMX26_01468 at 1521.954 kb on - strand, within MPMX26_01468 at 1521.954 kb on - strand, within MPMX26_01468 at 1521.954 kb on - strand, within MPMX26_01468 at 1521.957 kb on - strand, within MPMX26_01468 at 1522.027 kb on - strand, within MPMX26_01468 at 1522.027 kb on - strand, within MPMX26_01468 at 1522.264 kb on - strand, within MPMX26_01468 at 1522.287 kb on - strand, within MPMX26_01468 at 1522.323 kb on - strand at 1522.329 kb on - strand at 1522.329 kb on - strand at 1522.363 kb on - strand at 1522.392 kb on - strand at 1522.430 kb on - strand at 1523.257 kb on + strand, within MPMX26_01469 at 1523.358 kb on + strand, within MPMX26_01469 at 1523.371 kb on + strand, within MPMX26_01469 at 1523.415 kb on + strand, within MPMX26_01469 at 1523.440 kb on + strand, within MPMX26_01469 at 1523.476 kb on + strand, within MPMX26_01469 at 1523.478 kb on + strand, within MPMX26_01469 at 1523.479 kb on + strand, within MPMX26_01469 at 1523.479 kb on + strand, within MPMX26_01469 at 1523.520 kb on + strand, within MPMX26_01469 at 1523.580 kb on + strand, within MPMX26_01469 at 1523.580 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.602 kb on + strand, within MPMX26_01469 at 1523.603 kb on + strand, within MPMX26_01469 at 1523.607 kb on + strand, within MPMX26_01469 at 1523.614 kb on + strand, within MPMX26_01469 at 1523.614 kb on + strand, within MPMX26_01469 at 1523.619 kb on + strand, within MPMX26_01469 at 1523.622 kb on - strand, within MPMX26_01469 at 1523.685 kb on + strand, within MPMX26_01469 at 1523.821 kb on + strand, within MPMX26_01469 at 1523.848 kb on + strand, within MPMX26_01469 at 1523.917 kb on + strand, within MPMX26_01469 at 1523.929 kb on + strand, within MPMX26_01469 at 1523.970 kb on + strand, within MPMX26_01469 at 1523.970 kb on + strand, within MPMX26_01469 at 1523.970 kb on + strand, within MPMX26_01469 at 1523.970 kb on + strand, within MPMX26_01469 at 1523.995 kb on + strand, within MPMX26_01469 at 1524.082 kb on + strand, within MPMX26_01469 at 1524.103 kb on + strand, within MPMX26_01469 at 1524.177 kb on + strand, within MPMX26_01469 at 1524.180 kb on + strand, within MPMX26_01469 at 1524.180 kb on + strand, within MPMX26_01469 at 1524.429 kb on - strand at 1524.527 kb on - strand, within MPMX26_01470 at 1524.563 kb on - strand, within MPMX26_01470 at 1524.563 kb on - strand, within MPMX26_01470 at 1524.564 kb on - strand, within MPMX26_01470 at 1524.599 kb on - strand, within MPMX26_01470 at 1524.608 kb on - strand, within MPMX26_01470 at 1524.656 kb on - strand, within MPMX26_01470 at 1524.656 kb on - strand, within MPMX26_01470 at 1524.656 kb on - strand, within MPMX26_01470 at 1524.656 kb on - strand, within MPMX26_01470 at 1524.695 kb on - strand, within MPMX26_01470 at 1524.719 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1524.734 kb on - strand, within MPMX26_01470 at 1525.290 kb on + strand, within MPMX26_01471
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,521,949 - MPMX26_01468 0.67 -0.9 1,521,954 - MPMX26_01468 0.67 -0.2 1,521,954 - MPMX26_01468 0.67 -2.8 1,521,954 - MPMX26_01468 0.67 -1.8 1,521,954 - MPMX26_01468 0.67 -1.5 1,521,957 - MPMX26_01468 0.67 -2.8 1,522,027 - MPMX26_01468 0.72 -3.1 1,522,027 - MPMX26_01468 0.72 -1.9 1,522,264 - MPMX26_01468 0.88 -1.0 1,522,287 - MPMX26_01468 0.89 -0.8 1,522,323 - -0.2 1,522,329 - -1.8 1,522,329 - -2.5 1,522,363 - -1.7 1,522,392 - -1.9 1,522,430 - -0.1 1,523,257 + MPMX26_01469 0.26 -0.1 1,523,358 + MPMX26_01469 0.33 +1.7 1,523,371 + MPMX26_01469 0.34 -0.1 1,523,415 + MPMX26_01469 0.37 -0.2 1,523,440 + MPMX26_01469 0.39 +1.7 1,523,476 + MPMX26_01469 0.41 +0.2 1,523,478 + MPMX26_01469 0.41 +1.3 1,523,479 + MPMX26_01469 0.41 -1.6 1,523,479 + MPMX26_01469 0.41 +1.0 1,523,520 + MPMX26_01469 0.44 -0.0 1,523,580 + MPMX26_01469 0.48 +1.6 1,523,580 + MPMX26_01469 0.48 +0.2 1,523,602 + MPMX26_01469 0.50 -1.4 1,523,602 + MPMX26_01469 0.50 +0.0 1,523,602 + MPMX26_01469 0.50 +0.2 1,523,602 + MPMX26_01469 0.50 +0.5 1,523,602 + MPMX26_01469 0.50 -0.7 1,523,602 + MPMX26_01469 0.50 +0.5 1,523,602 + MPMX26_01469 0.50 +0.9 1,523,602 + MPMX26_01469 0.50 +0.6 1,523,602 + MPMX26_01469 0.50 +0.3 1,523,603 + MPMX26_01469 0.50 +1.0 1,523,607 + MPMX26_01469 0.50 -1.2 1,523,614 + MPMX26_01469 0.51 -0.1 1,523,614 + MPMX26_01469 0.51 +0.5 1,523,619 + MPMX26_01469 0.51 -0.8 1,523,622 - MPMX26_01469 0.51 -1.0 1,523,685 + MPMX26_01469 0.56 -0.7 1,523,821 + MPMX26_01469 0.65 -1.7 1,523,848 + MPMX26_01469 0.67 -0.1 1,523,917 + MPMX26_01469 0.72 +0.4 1,523,929 + MPMX26_01469 0.72 -0.2 1,523,970 + MPMX26_01469 0.75 +2.0 1,523,970 + MPMX26_01469 0.75 +1.9 1,523,970 + MPMX26_01469 0.75 -0.4 1,523,970 + MPMX26_01469 0.75 -0.1 1,523,995 + MPMX26_01469 0.77 +2.2 1,524,082 + MPMX26_01469 0.83 -0.8 1,524,103 + MPMX26_01469 0.84 +0.8 1,524,177 + MPMX26_01469 0.89 -0.3 1,524,180 + MPMX26_01469 0.90 +0.7 1,524,180 + MPMX26_01469 0.90 +0.7 1,524,429 - +0.3 1,524,527 - MPMX26_01470 0.28 -0.5 1,524,563 - MPMX26_01470 0.36 -1.2 1,524,563 - MPMX26_01470 0.36 +0.1 1,524,564 - MPMX26_01470 0.36 +0.1 1,524,599 - MPMX26_01470 0.44 -0.7 1,524,608 - MPMX26_01470 0.46 -1.3 1,524,656 - MPMX26_01470 0.57 -1.5 1,524,656 - MPMX26_01470 0.57 +1.2 1,524,656 - MPMX26_01470 0.57 +0.3 1,524,656 - MPMX26_01470 0.57 -1.0 1,524,695 - MPMX26_01470 0.66 -0.7 1,524,719 - MPMX26_01470 0.71 +1.6 1,524,734 - MPMX26_01470 0.75 +0.2 1,524,734 - MPMX26_01470 0.75 -0.2 1,524,734 - MPMX26_01470 0.75 -0.6 1,524,734 - MPMX26_01470 0.75 -0.1 1,524,734 - MPMX26_01470 0.75 -0.7 1,524,734 - MPMX26_01470 0.75 -0.4 1,524,734 - MPMX26_01470 0.75 -0.3 1,525,290 + MPMX26_01471 0.22 +0.3
Or see this region's nucleotide sequence