Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01264

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01263 and MPMX26_01264 are separated by 390 nucleotidesMPMX26_01264 and MPMX26_01265 are separated by 385 nucleotides MPMX26_01263: MPMX26_01263 - Branched-chain amino acid transport system 2 carrier protein, at 1,335,655 to 1,336,956 _01263 MPMX26_01264: MPMX26_01264 - Methionine aminopeptidase, at 1,337,347 to 1,338,141 _01264 MPMX26_01265: MPMX26_01265 - HTH-type transcriptional regulator DmlR, at 1,338,527 to 1,339,429 _01265 Position (kb) 1337 1338 1339Strain fitness (log2 ratio) -3 -2 -1 0 1at 1336.389 kb on - strand, within MPMX26_01263at 1336.414 kb on - strand, within MPMX26_01263at 1336.453 kb on - strand, within MPMX26_01263at 1336.462 kb on - strand, within MPMX26_01263at 1336.462 kb on - strand, within MPMX26_01263at 1336.517 kb on - strand, within MPMX26_01263at 1336.526 kb on - strand, within MPMX26_01263at 1336.555 kb on - strand, within MPMX26_01263at 1336.555 kb on - strand, within MPMX26_01263at 1336.555 kb on - strand, within MPMX26_01263at 1336.599 kb on - strand, within MPMX26_01263at 1336.655 kb on - strand, within MPMX26_01263at 1336.699 kb on - strand, within MPMX26_01263at 1336.739 kb on - strand, within MPMX26_01263at 1336.813 kb on - strand, within MPMX26_01263at 1336.827 kb on - strandat 1336.837 kb on - strandat 1336.842 kb on - strandat 1336.848 kb on - strandat 1336.848 kb on - strandat 1336.848 kb on - strandat 1336.850 kb on - strandat 1336.917 kb on - strandat 1337.377 kb on + strandat 1337.401 kb on + strandat 1337.435 kb on + strand, within MPMX26_01264at 1337.435 kb on + strand, within MPMX26_01264at 1337.448 kb on + strand, within MPMX26_01264at 1337.583 kb on + strand, within MPMX26_01264at 1337.588 kb on + strand, within MPMX26_01264at 1337.669 kb on + strand, within MPMX26_01264at 1337.669 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.691 kb on + strand, within MPMX26_01264at 1337.696 kb on + strand, within MPMX26_01264at 1337.701 kb on + strand, within MPMX26_01264at 1337.706 kb on + strand, within MPMX26_01264at 1337.773 kb on + strand, within MPMX26_01264at 1337.773 kb on + strand, within MPMX26_01264at 1337.773 kb on + strand, within MPMX26_01264at 1337.773 kb on + strand, within MPMX26_01264at 1337.773 kb on + strand, within MPMX26_01264at 1337.783 kb on + strand, within MPMX26_01264at 1337.793 kb on + strand, within MPMX26_01264at 1337.829 kb on + strand, within MPMX26_01264at 1337.835 kb on + strand, within MPMX26_01264at 1337.835 kb on + strand, within MPMX26_01264at 1337.836 kb on + strand, within MPMX26_01264at 1337.836 kb on + strand, within MPMX26_01264at 1337.836 kb on + strand, within MPMX26_01264at 1337.836 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.895 kb on + strand, within MPMX26_01264at 1337.896 kb on + strand, within MPMX26_01264at 1337.902 kb on + strand, within MPMX26_01264at 1337.902 kb on + strand, within MPMX26_01264at 1337.902 kb on + strand, within MPMX26_01264at 1337.902 kb on + strand, within MPMX26_01264at 1337.907 kb on + strand, within MPMX26_01264at 1337.912 kb on + strand, within MPMX26_01264at 1337.919 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.930 kb on + strand, within MPMX26_01264at 1337.940 kb on + strand, within MPMX26_01264at 1337.940 kb on + strand, within MPMX26_01264at 1337.940 kb on + strand, within MPMX26_01264at 1337.947 kb on + strand, within MPMX26_01264at 1337.947 kb on + strand, within MPMX26_01264at 1337.953 kb on + strand, within MPMX26_01264at 1337.953 kb on + strand, within MPMX26_01264at 1337.983 kb on + strand, within MPMX26_01264at 1338.024 kb on + strand, within MPMX26_01264at 1338.088 kb on + strandat 1338.096 kb on + strandat 1338.096 kb on + strandat 1338.096 kb on + strandat 1338.107 kb on + strandat 1338.121 kb on + strandat 1338.410 kb on + strandat 1338.415 kb on + strandat 1338.592 kb on - strandat 1338.641 kb on - strand, within MPMX26_01265at 1338.703 kb on - strand, within MPMX26_01265

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,336,389 - MPMX26_01263 0.56 +0.8
1,336,414 - MPMX26_01263 0.58 -0.1
1,336,453 - MPMX26_01263 0.61 +0.6
1,336,462 - MPMX26_01263 0.62 +0.0
1,336,462 - MPMX26_01263 0.62 +0.8
1,336,517 - MPMX26_01263 0.66 +1.0
1,336,526 - MPMX26_01263 0.67 +1.0
1,336,555 - MPMX26_01263 0.69 +0.2
1,336,555 - MPMX26_01263 0.69 +0.2
1,336,555 - MPMX26_01263 0.69 +0.9
1,336,599 - MPMX26_01263 0.73 -0.1
1,336,655 - MPMX26_01263 0.77 -0.6
1,336,699 - MPMX26_01263 0.80 +1.0
1,336,739 - MPMX26_01263 0.83 -0.2
1,336,813 - MPMX26_01263 0.89 -0.7
1,336,827 - -1.4
1,336,837 - -0.2
1,336,842 - +0.6
1,336,848 - +1.4
1,336,848 - -1.8
1,336,848 - +0.3
1,336,850 - -0.9
1,336,917 - -0.9
1,337,377 + -0.4
1,337,401 + -0.8
1,337,435 + MPMX26_01264 0.11 +0.3
1,337,435 + MPMX26_01264 0.11 +0.0
1,337,448 + MPMX26_01264 0.13 -0.2
1,337,583 + MPMX26_01264 0.30 -0.7
1,337,588 + MPMX26_01264 0.30 -0.6
1,337,669 + MPMX26_01264 0.41 -0.6
1,337,669 + MPMX26_01264 0.41 +0.1
1,337,691 + MPMX26_01264 0.43 -2.6
1,337,691 + MPMX26_01264 0.43 +0.7
1,337,691 + MPMX26_01264 0.43 -1.8
1,337,691 + MPMX26_01264 0.43 +0.1
1,337,691 + MPMX26_01264 0.43 -0.2
1,337,691 + MPMX26_01264 0.43 +0.8
1,337,691 + MPMX26_01264 0.43 -1.3
1,337,691 + MPMX26_01264 0.43 -0.4
1,337,696 + MPMX26_01264 0.44 -1.5
1,337,701 + MPMX26_01264 0.45 -0.9
1,337,706 + MPMX26_01264 0.45 -0.9
1,337,773 + MPMX26_01264 0.54 -0.9
1,337,773 + MPMX26_01264 0.54 -2.8
1,337,773 + MPMX26_01264 0.54 -0.6
1,337,773 + MPMX26_01264 0.54 -0.5
1,337,773 + MPMX26_01264 0.54 -0.1
1,337,783 + MPMX26_01264 0.55 -0.7
1,337,793 + MPMX26_01264 0.56 -1.1
1,337,829 + MPMX26_01264 0.61 -0.9
1,337,835 + MPMX26_01264 0.61 +0.8
1,337,835 + MPMX26_01264 0.61 -1.5
1,337,836 + MPMX26_01264 0.62 -1.4
1,337,836 + MPMX26_01264 0.62 -1.2
1,337,836 + MPMX26_01264 0.62 -2.0
1,337,836 + MPMX26_01264 0.62 -2.2
1,337,895 + MPMX26_01264 0.69 +0.4
1,337,895 + MPMX26_01264 0.69 -0.8
1,337,895 + MPMX26_01264 0.69 -0.2
1,337,895 + MPMX26_01264 0.69 -0.3
1,337,895 + MPMX26_01264 0.69 +0.2
1,337,895 + MPMX26_01264 0.69 -0.5
1,337,895 + MPMX26_01264 0.69 -0.7
1,337,896 + MPMX26_01264 0.69 -1.1
1,337,902 + MPMX26_01264 0.70 -1.3
1,337,902 + MPMX26_01264 0.70 +0.4
1,337,902 + MPMX26_01264 0.70 -0.6
1,337,902 + MPMX26_01264 0.70 -1.3
1,337,907 + MPMX26_01264 0.70 -1.0
1,337,912 + MPMX26_01264 0.71 +0.3
1,337,919 + MPMX26_01264 0.72 -0.3
1,337,930 + MPMX26_01264 0.73 +0.5
1,337,930 + MPMX26_01264 0.73 +0.9
1,337,930 + MPMX26_01264 0.73 -1.3
1,337,930 + MPMX26_01264 0.73 -0.0
1,337,930 + MPMX26_01264 0.73 +0.7
1,337,930 + MPMX26_01264 0.73 +0.8
1,337,940 + MPMX26_01264 0.75 -0.7
1,337,940 + MPMX26_01264 0.75 -0.6
1,337,940 + MPMX26_01264 0.75 -1.2
1,337,947 + MPMX26_01264 0.75 -0.7
1,337,947 + MPMX26_01264 0.75 +0.3
1,337,953 + MPMX26_01264 0.76 -0.8
1,337,953 + MPMX26_01264 0.76 -0.1
1,337,983 + MPMX26_01264 0.80 -1.1
1,338,024 + MPMX26_01264 0.85 -0.4
1,338,088 + -2.7
1,338,096 + +0.5
1,338,096 + -0.2
1,338,096 + -1.0
1,338,107 + -1.7
1,338,121 + -0.4
1,338,410 + -0.5
1,338,415 + +0.0
1,338,592 - -0.1
1,338,641 - MPMX26_01265 0.13 +0.7
1,338,703 - MPMX26_01265 0.19 +1.7

Or see this region's nucleotide sequence