Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01263 and MPMX26_01264 are separated by 390 nucleotides MPMX26_01264 and MPMX26_01265 are separated by 385 nucleotides
MPMX26_01263: MPMX26_01263 - Branched-chain amino acid transport system 2 carrier protein, at 1,335,655 to 1,336,956
_01263
MPMX26_01264: MPMX26_01264 - Methionine aminopeptidase, at 1,337,347 to 1,338,141
_01264
MPMX26_01265: MPMX26_01265 - HTH-type transcriptional regulator DmlR, at 1,338,527 to 1,339,429
_01265
Position (kb)
1337
1338
1339 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1336.389 kb on - strand, within MPMX26_01263 at 1336.414 kb on - strand, within MPMX26_01263 at 1336.453 kb on - strand, within MPMX26_01263 at 1336.462 kb on - strand, within MPMX26_01263 at 1336.462 kb on - strand, within MPMX26_01263 at 1336.517 kb on - strand, within MPMX26_01263 at 1336.526 kb on - strand, within MPMX26_01263 at 1336.555 kb on - strand, within MPMX26_01263 at 1336.555 kb on - strand, within MPMX26_01263 at 1336.555 kb on - strand, within MPMX26_01263 at 1336.599 kb on - strand, within MPMX26_01263 at 1336.655 kb on - strand, within MPMX26_01263 at 1336.699 kb on - strand, within MPMX26_01263 at 1336.739 kb on - strand, within MPMX26_01263 at 1336.813 kb on - strand, within MPMX26_01263 at 1336.827 kb on - strand at 1336.837 kb on - strand at 1336.842 kb on - strand at 1336.848 kb on - strand at 1336.848 kb on - strand at 1336.848 kb on - strand at 1336.850 kb on - strand at 1336.917 kb on - strand at 1337.377 kb on + strand at 1337.401 kb on + strand at 1337.435 kb on + strand, within MPMX26_01264 at 1337.435 kb on + strand, within MPMX26_01264 at 1337.448 kb on + strand, within MPMX26_01264 at 1337.583 kb on + strand, within MPMX26_01264 at 1337.588 kb on + strand, within MPMX26_01264 at 1337.669 kb on + strand, within MPMX26_01264 at 1337.669 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.691 kb on + strand, within MPMX26_01264 at 1337.696 kb on + strand, within MPMX26_01264 at 1337.701 kb on + strand, within MPMX26_01264 at 1337.706 kb on + strand, within MPMX26_01264 at 1337.773 kb on + strand, within MPMX26_01264 at 1337.773 kb on + strand, within MPMX26_01264 at 1337.773 kb on + strand, within MPMX26_01264 at 1337.773 kb on + strand, within MPMX26_01264 at 1337.773 kb on + strand, within MPMX26_01264 at 1337.783 kb on + strand, within MPMX26_01264 at 1337.793 kb on + strand, within MPMX26_01264 at 1337.829 kb on + strand, within MPMX26_01264 at 1337.835 kb on + strand, within MPMX26_01264 at 1337.835 kb on + strand, within MPMX26_01264 at 1337.836 kb on + strand, within MPMX26_01264 at 1337.836 kb on + strand, within MPMX26_01264 at 1337.836 kb on + strand, within MPMX26_01264 at 1337.836 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.895 kb on + strand, within MPMX26_01264 at 1337.896 kb on + strand, within MPMX26_01264 at 1337.902 kb on + strand, within MPMX26_01264 at 1337.902 kb on + strand, within MPMX26_01264 at 1337.902 kb on + strand, within MPMX26_01264 at 1337.902 kb on + strand, within MPMX26_01264 at 1337.907 kb on + strand, within MPMX26_01264 at 1337.912 kb on + strand, within MPMX26_01264 at 1337.919 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.930 kb on + strand, within MPMX26_01264 at 1337.940 kb on + strand, within MPMX26_01264 at 1337.940 kb on + strand, within MPMX26_01264 at 1337.940 kb on + strand, within MPMX26_01264 at 1337.947 kb on + strand, within MPMX26_01264 at 1337.947 kb on + strand, within MPMX26_01264 at 1337.953 kb on + strand, within MPMX26_01264 at 1337.953 kb on + strand, within MPMX26_01264 at 1337.983 kb on + strand, within MPMX26_01264 at 1338.024 kb on + strand, within MPMX26_01264 at 1338.088 kb on + strand at 1338.096 kb on + strand at 1338.096 kb on + strand at 1338.096 kb on + strand at 1338.107 kb on + strand at 1338.121 kb on + strand at 1338.410 kb on + strand at 1338.415 kb on + strand at 1338.592 kb on - strand at 1338.641 kb on - strand, within MPMX26_01265 at 1338.703 kb on - strand, within MPMX26_01265
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,336,389 - MPMX26_01263 0.56 +0.8 1,336,414 - MPMX26_01263 0.58 -0.1 1,336,453 - MPMX26_01263 0.61 +0.6 1,336,462 - MPMX26_01263 0.62 +0.0 1,336,462 - MPMX26_01263 0.62 +0.8 1,336,517 - MPMX26_01263 0.66 +1.0 1,336,526 - MPMX26_01263 0.67 +1.0 1,336,555 - MPMX26_01263 0.69 +0.2 1,336,555 - MPMX26_01263 0.69 +0.2 1,336,555 - MPMX26_01263 0.69 +0.9 1,336,599 - MPMX26_01263 0.73 -0.1 1,336,655 - MPMX26_01263 0.77 -0.6 1,336,699 - MPMX26_01263 0.80 +1.0 1,336,739 - MPMX26_01263 0.83 -0.2 1,336,813 - MPMX26_01263 0.89 -0.7 1,336,827 - -1.4 1,336,837 - -0.2 1,336,842 - +0.6 1,336,848 - +1.4 1,336,848 - -1.8 1,336,848 - +0.3 1,336,850 - -0.9 1,336,917 - -0.9 1,337,377 + -0.4 1,337,401 + -0.8 1,337,435 + MPMX26_01264 0.11 +0.3 1,337,435 + MPMX26_01264 0.11 +0.0 1,337,448 + MPMX26_01264 0.13 -0.2 1,337,583 + MPMX26_01264 0.30 -0.7 1,337,588 + MPMX26_01264 0.30 -0.6 1,337,669 + MPMX26_01264 0.41 -0.6 1,337,669 + MPMX26_01264 0.41 +0.1 1,337,691 + MPMX26_01264 0.43 -2.6 1,337,691 + MPMX26_01264 0.43 +0.7 1,337,691 + MPMX26_01264 0.43 -1.8 1,337,691 + MPMX26_01264 0.43 +0.1 1,337,691 + MPMX26_01264 0.43 -0.2 1,337,691 + MPMX26_01264 0.43 +0.8 1,337,691 + MPMX26_01264 0.43 -1.3 1,337,691 + MPMX26_01264 0.43 -0.4 1,337,696 + MPMX26_01264 0.44 -1.5 1,337,701 + MPMX26_01264 0.45 -0.9 1,337,706 + MPMX26_01264 0.45 -0.9 1,337,773 + MPMX26_01264 0.54 -0.9 1,337,773 + MPMX26_01264 0.54 -2.8 1,337,773 + MPMX26_01264 0.54 -0.6 1,337,773 + MPMX26_01264 0.54 -0.5 1,337,773 + MPMX26_01264 0.54 -0.1 1,337,783 + MPMX26_01264 0.55 -0.7 1,337,793 + MPMX26_01264 0.56 -1.1 1,337,829 + MPMX26_01264 0.61 -0.9 1,337,835 + MPMX26_01264 0.61 +0.8 1,337,835 + MPMX26_01264 0.61 -1.5 1,337,836 + MPMX26_01264 0.62 -1.4 1,337,836 + MPMX26_01264 0.62 -1.2 1,337,836 + MPMX26_01264 0.62 -2.0 1,337,836 + MPMX26_01264 0.62 -2.2 1,337,895 + MPMX26_01264 0.69 +0.4 1,337,895 + MPMX26_01264 0.69 -0.8 1,337,895 + MPMX26_01264 0.69 -0.2 1,337,895 + MPMX26_01264 0.69 -0.3 1,337,895 + MPMX26_01264 0.69 +0.2 1,337,895 + MPMX26_01264 0.69 -0.5 1,337,895 + MPMX26_01264 0.69 -0.7 1,337,896 + MPMX26_01264 0.69 -1.1 1,337,902 + MPMX26_01264 0.70 -1.3 1,337,902 + MPMX26_01264 0.70 +0.4 1,337,902 + MPMX26_01264 0.70 -0.6 1,337,902 + MPMX26_01264 0.70 -1.3 1,337,907 + MPMX26_01264 0.70 -1.0 1,337,912 + MPMX26_01264 0.71 +0.3 1,337,919 + MPMX26_01264 0.72 -0.3 1,337,930 + MPMX26_01264 0.73 +0.5 1,337,930 + MPMX26_01264 0.73 +0.9 1,337,930 + MPMX26_01264 0.73 -1.3 1,337,930 + MPMX26_01264 0.73 -0.0 1,337,930 + MPMX26_01264 0.73 +0.7 1,337,930 + MPMX26_01264 0.73 +0.8 1,337,940 + MPMX26_01264 0.75 -0.7 1,337,940 + MPMX26_01264 0.75 -0.6 1,337,940 + MPMX26_01264 0.75 -1.2 1,337,947 + MPMX26_01264 0.75 -0.7 1,337,947 + MPMX26_01264 0.75 +0.3 1,337,953 + MPMX26_01264 0.76 -0.8 1,337,953 + MPMX26_01264 0.76 -0.1 1,337,983 + MPMX26_01264 0.80 -1.1 1,338,024 + MPMX26_01264 0.85 -0.4 1,338,088 + -2.7 1,338,096 + +0.5 1,338,096 + -0.2 1,338,096 + -1.0 1,338,107 + -1.7 1,338,121 + -0.4 1,338,410 + -0.5 1,338,415 + +0.0 1,338,592 - -0.1 1,338,641 - MPMX26_01265 0.13 +0.7 1,338,703 - MPMX26_01265 0.19 +1.7
Or see this region's nucleotide sequence