Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01039

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01038 and MPMX26_01039 are separated by 100 nucleotidesMPMX26_01039 and MPMX26_01040 overlap by 4 nucleotides MPMX26_01038: MPMX26_01038 - Phosphate-binding protein PstS, at 1,100,986 to 1,102,017 _01038 MPMX26_01039: MPMX26_01039 - hypothetical protein, at 1,102,118 to 1,103,497 _01039 MPMX26_01040: MPMX26_01040 - hypothetical protein, at 1,103,494 to 1,104,891 _01040 Position (kb) 1102 1103 1104Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1101.441 kb on + strand, within MPMX26_01038at 1101.441 kb on + strand, within MPMX26_01038at 1101.651 kb on + strand, within MPMX26_01038at 1101.660 kb on + strand, within MPMX26_01038at 1101.739 kb on + strand, within MPMX26_01038at 1101.773 kb on + strand, within MPMX26_01038at 1101.817 kb on + strand, within MPMX26_01038at 1101.831 kb on + strand, within MPMX26_01038at 1101.847 kb on + strand, within MPMX26_01038at 1101.855 kb on + strand, within MPMX26_01038at 1101.877 kb on + strand, within MPMX26_01038at 1101.943 kb on + strandat 1101.957 kb on + strandat 1101.990 kb on + strandat 1101.999 kb on + strandat 1102.258 kb on + strand, within MPMX26_01039at 1102.262 kb on + strand, within MPMX26_01039at 1102.306 kb on + strand, within MPMX26_01039at 1102.333 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.373 kb on + strand, within MPMX26_01039at 1102.375 kb on + strand, within MPMX26_01039at 1102.406 kb on + strand, within MPMX26_01039at 1102.411 kb on + strand, within MPMX26_01039at 1102.411 kb on + strand, within MPMX26_01039at 1102.457 kb on + strand, within MPMX26_01039at 1102.475 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.550 kb on + strand, within MPMX26_01039at 1102.555 kb on + strand, within MPMX26_01039at 1102.585 kb on + strand, within MPMX26_01039at 1102.585 kb on + strand, within MPMX26_01039at 1102.745 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.807 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.820 kb on + strand, within MPMX26_01039at 1102.825 kb on + strand, within MPMX26_01039at 1102.931 kb on + strand, within MPMX26_01039at 1102.970 kb on + strand, within MPMX26_01039at 1102.999 kb on + strand, within MPMX26_01039at 1103.036 kb on + strand, within MPMX26_01039at 1103.173 kb on + strand, within MPMX26_01039at 1103.173 kb on + strand, within MPMX26_01039at 1103.207 kb on + strand, within MPMX26_01039at 1103.230 kb on + strand, within MPMX26_01039at 1103.502 kb on + strandat 1103.502 kb on + strandat 1103.502 kb on + strandat 1103.697 kb on + strand, within MPMX26_01040at 1103.697 kb on + strand, within MPMX26_01040at 1103.697 kb on + strand, within MPMX26_01040at 1103.728 kb on + strand, within MPMX26_01040at 1103.733 kb on + strand, within MPMX26_01040at 1103.733 kb on + strand, within MPMX26_01040at 1103.850 kb on + strand, within MPMX26_01040at 1103.932 kb on + strand, within MPMX26_01040at 1103.949 kb on + strand, within MPMX26_01040at 1104.040 kb on + strand, within MPMX26_01040at 1104.142 kb on + strand, within MPMX26_01040at 1104.143 kb on + strand, within MPMX26_01040at 1104.145 kb on + strand, within MPMX26_01040at 1104.145 kb on + strand, within MPMX26_01040at 1104.145 kb on + strand, within MPMX26_01040at 1104.145 kb on + strand, within MPMX26_01040at 1104.145 kb on + strand, within MPMX26_01040at 1104.219 kb on + strand, within MPMX26_01040at 1104.274 kb on + strand, within MPMX26_01040

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,101,441 + MPMX26_01038 0.44 -0.2
1,101,441 + MPMX26_01038 0.44 +0.8
1,101,651 + MPMX26_01038 0.64 -0.2
1,101,660 + MPMX26_01038 0.65 +0.9
1,101,739 + MPMX26_01038 0.73 +1.1
1,101,773 + MPMX26_01038 0.76 +0.1
1,101,817 + MPMX26_01038 0.81 -0.5
1,101,831 + MPMX26_01038 0.82 -1.4
1,101,847 + MPMX26_01038 0.83 -1.0
1,101,855 + MPMX26_01038 0.84 +0.6
1,101,877 + MPMX26_01038 0.86 -1.6
1,101,943 + +0.1
1,101,957 + +0.7
1,101,990 + +0.2
1,101,999 + +0.4
1,102,258 + MPMX26_01039 0.10 -1.8
1,102,262 + MPMX26_01039 0.10 -1.6
1,102,306 + MPMX26_01039 0.14 -0.8
1,102,333 + MPMX26_01039 0.16 -0.5
1,102,373 + MPMX26_01039 0.18 -0.4
1,102,373 + MPMX26_01039 0.18 -1.6
1,102,373 + MPMX26_01039 0.18 -0.9
1,102,375 + MPMX26_01039 0.19 -0.9
1,102,406 + MPMX26_01039 0.21 -2.4
1,102,411 + MPMX26_01039 0.21 -1.3
1,102,411 + MPMX26_01039 0.21 +0.5
1,102,457 + MPMX26_01039 0.25 -1.4
1,102,475 + MPMX26_01039 0.26 -2.5
1,102,550 + MPMX26_01039 0.31 -1.4
1,102,550 + MPMX26_01039 0.31 -2.0
1,102,550 + MPMX26_01039 0.31 -0.9
1,102,550 + MPMX26_01039 0.31 -2.7
1,102,550 + MPMX26_01039 0.31 -1.2
1,102,555 + MPMX26_01039 0.32 +1.7
1,102,585 + MPMX26_01039 0.34 +0.8
1,102,585 + MPMX26_01039 0.34 -1.4
1,102,745 + MPMX26_01039 0.45 -0.9
1,102,807 + MPMX26_01039 0.50 -2.4
1,102,807 + MPMX26_01039 0.50 -1.4
1,102,807 + MPMX26_01039 0.50 +0.2
1,102,807 + MPMX26_01039 0.50 +0.3
1,102,807 + MPMX26_01039 0.50 -2.1
1,102,807 + MPMX26_01039 0.50 +2.9
1,102,807 + MPMX26_01039 0.50 -0.7
1,102,807 + MPMX26_01039 0.50 +0.0
1,102,807 + MPMX26_01039 0.50 -0.4
1,102,820 + MPMX26_01039 0.51 -1.2
1,102,820 + MPMX26_01039 0.51 -0.5
1,102,820 + MPMX26_01039 0.51 -1.6
1,102,820 + MPMX26_01039 0.51 -0.3
1,102,820 + MPMX26_01039 0.51 +0.5
1,102,825 + MPMX26_01039 0.51 -0.1
1,102,931 + MPMX26_01039 0.59 -0.1
1,102,970 + MPMX26_01039 0.62 -0.8
1,102,999 + MPMX26_01039 0.64 -0.8
1,103,036 + MPMX26_01039 0.67 -1.9
1,103,173 + MPMX26_01039 0.76 -2.1
1,103,173 + MPMX26_01039 0.76 +0.3
1,103,207 + MPMX26_01039 0.79 -1.1
1,103,230 + MPMX26_01039 0.81 +0.1
1,103,502 + -1.8
1,103,502 + +0.6
1,103,502 + -0.8
1,103,697 + MPMX26_01040 0.15 +0.1
1,103,697 + MPMX26_01040 0.15 -1.1
1,103,697 + MPMX26_01040 0.15 -0.9
1,103,728 + MPMX26_01040 0.17 +0.4
1,103,733 + MPMX26_01040 0.17 -0.9
1,103,733 + MPMX26_01040 0.17 -1.7
1,103,850 + MPMX26_01040 0.25 +1.2
1,103,932 + MPMX26_01040 0.31 -1.8
1,103,949 + MPMX26_01040 0.33 +0.3
1,104,040 + MPMX26_01040 0.39 +0.4
1,104,142 + MPMX26_01040 0.46 -1.7
1,104,143 + MPMX26_01040 0.46 -0.2
1,104,145 + MPMX26_01040 0.47 -2.2
1,104,145 + MPMX26_01040 0.47 -0.5
1,104,145 + MPMX26_01040 0.47 -0.1
1,104,145 + MPMX26_01040 0.47 -1.5
1,104,145 + MPMX26_01040 0.47 -0.3
1,104,219 + MPMX26_01040 0.52 -1.0
1,104,274 + MPMX26_01040 0.56 -0.2

Or see this region's nucleotide sequence