Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00919

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00918 and MPMX26_00919 are separated by 487 nucleotidesMPMX26_00919 and MPMX26_00920 are separated by 2 nucleotides MPMX26_00918: MPMX26_00918 - Prophage integrase IntA, at 963,442 to 964,722 _00918 MPMX26_00919: MPMX26_00919 - hypothetical protein, at 965,210 to 966,388 _00919 MPMX26_00920: MPMX26_00920 - UDP-N-acetylglucosamine 2-epimerase, at 966,391 to 967,539 _00920 Position (kb) 965 966 967Strain fitness (log2 ratio) -1 0 1 2 3at 964.224 kb on - strand, within MPMX26_00918at 964.282 kb on - strand, within MPMX26_00918at 964.289 kb on - strand, within MPMX26_00918at 964.309 kb on - strand, within MPMX26_00918at 964.451 kb on - strand, within MPMX26_00918at 964.451 kb on - strand, within MPMX26_00918at 964.452 kb on - strand, within MPMX26_00918at 964.454 kb on - strand, within MPMX26_00918at 964.456 kb on - strand, within MPMX26_00918at 964.517 kb on - strand, within MPMX26_00918at 964.517 kb on - strand, within MPMX26_00918at 964.517 kb on - strand, within MPMX26_00918at 964.524 kb on - strand, within MPMX26_00918at 964.587 kb on - strand, within MPMX26_00918at 964.592 kb on - strand, within MPMX26_00918at 964.615 kb on - strandat 964.656 kb on - strandat 965.293 kb on + strandat 965.293 kb on + strandat 965.293 kb on + strandat 965.309 kb on + strandat 965.314 kb on + strandat 965.314 kb on + strandat 965.372 kb on + strand, within MPMX26_00919at 965.372 kb on + strand, within MPMX26_00919at 965.372 kb on + strand, within MPMX26_00919at 965.372 kb on + strand, within MPMX26_00919at 965.372 kb on + strand, within MPMX26_00919at 965.477 kb on + strand, within MPMX26_00919at 965.477 kb on + strand, within MPMX26_00919at 965.477 kb on + strand, within MPMX26_00919at 965.608 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.621 kb on + strand, within MPMX26_00919at 965.632 kb on + strand, within MPMX26_00919at 965.632 kb on + strand, within MPMX26_00919at 965.632 kb on + strand, within MPMX26_00919at 965.704 kb on + strand, within MPMX26_00919at 965.704 kb on + strand, within MPMX26_00919at 965.768 kb on + strand, within MPMX26_00919at 965.872 kb on + strand, within MPMX26_00919at 965.968 kb on + strand, within MPMX26_00919at 965.995 kb on + strand, within MPMX26_00919at 965.996 kb on + strand, within MPMX26_00919at 965.996 kb on + strand, within MPMX26_00919at 965.996 kb on + strand, within MPMX26_00919at 966.001 kb on + strand, within MPMX26_00919at 966.001 kb on + strand, within MPMX26_00919at 966.014 kb on + strand, within MPMX26_00919at 966.014 kb on + strand, within MPMX26_00919at 966.019 kb on + strand, within MPMX26_00919at 966.167 kb on + strand, within MPMX26_00919at 966.206 kb on + strand, within MPMX26_00919at 966.415 kb on + strandat 966.435 kb on + strandat 966.435 kb on + strandat 966.435 kb on + strandat 966.525 kb on - strand, within MPMX26_00920at 966.616 kb on + strand, within MPMX26_00920at 966.616 kb on + strand, within MPMX26_00920at 966.616 kb on + strand, within MPMX26_00920at 966.616 kb on + strand, within MPMX26_00920at 966.616 kb on + strand, within MPMX26_00920at 966.673 kb on + strand, within MPMX26_00920at 966.673 kb on + strand, within MPMX26_00920at 966.673 kb on + strand, within MPMX26_00920at 966.673 kb on + strand, within MPMX26_00920at 966.673 kb on + strand, within MPMX26_00920at 966.694 kb on + strand, within MPMX26_00920at 966.694 kb on + strand, within MPMX26_00920at 966.694 kb on + strand, within MPMX26_00920at 966.706 kb on + strand, within MPMX26_00920at 966.754 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.925 kb on + strand, within MPMX26_00920at 966.927 kb on + strand, within MPMX26_00920at 966.927 kb on + strand, within MPMX26_00920at 966.927 kb on + strand, within MPMX26_00920at 966.949 kb on + strand, within MPMX26_00920at 967.098 kb on + strand, within MPMX26_00920at 967.098 kb on + strand, within MPMX26_00920at 967.098 kb on + strand, within MPMX26_00920at 967.114 kb on + strand, within MPMX26_00920at 967.168 kb on + strand, within MPMX26_00920at 967.168 kb on + strand, within MPMX26_00920at 967.198 kb on + strand, within MPMX26_00920at 967.215 kb on + strand, within MPMX26_00920at 967.257 kb on + strand, within MPMX26_00920at 967.369 kb on + strand, within MPMX26_00920at 967.374 kb on + strand, within MPMX26_00920

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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964,224 - MPMX26_00918 0.61 -1.0
964,282 - MPMX26_00918 0.66 +0.6
964,289 - MPMX26_00918 0.66 -0.4
964,309 - MPMX26_00918 0.68 -1.1
964,451 - MPMX26_00918 0.79 +0.0
964,451 - MPMX26_00918 0.79 -0.2
964,452 - MPMX26_00918 0.79 +0.3
964,454 - MPMX26_00918 0.79 -1.6
964,456 - MPMX26_00918 0.79 -0.4
964,517 - MPMX26_00918 0.84 -0.9
964,517 - MPMX26_00918 0.84 +0.3
964,517 - MPMX26_00918 0.84 -0.8
964,524 - MPMX26_00918 0.84 -0.4
964,587 - MPMX26_00918 0.89 -0.0
964,592 - MPMX26_00918 0.90 -0.0
964,615 - +0.5
964,656 - +0.9
965,293 + +0.3
965,293 + +0.1
965,293 + +0.9
965,309 + +1.6
965,314 + +0.6
965,314 + -0.1
965,372 + MPMX26_00919 0.14 -0.5
965,372 + MPMX26_00919 0.14 +0.3
965,372 + MPMX26_00919 0.14 -0.1
965,372 + MPMX26_00919 0.14 +0.7
965,372 + MPMX26_00919 0.14 +1.2
965,477 + MPMX26_00919 0.23 +0.2
965,477 + MPMX26_00919 0.23 +1.2
965,477 + MPMX26_00919 0.23 +0.4
965,608 + MPMX26_00919 0.34 +1.2
965,621 + MPMX26_00919 0.35 +0.6
965,621 + MPMX26_00919 0.35 +1.2
965,621 + MPMX26_00919 0.35 +0.7
965,621 + MPMX26_00919 0.35 +0.1
965,621 + MPMX26_00919 0.35 +1.5
965,621 + MPMX26_00919 0.35 +0.4
965,621 + MPMX26_00919 0.35 +0.4
965,621 + MPMX26_00919 0.35 +0.9
965,621 + MPMX26_00919 0.35 +0.4
965,621 + MPMX26_00919 0.35 -0.9
965,632 + MPMX26_00919 0.36 +0.4
965,632 + MPMX26_00919 0.36 +0.7
965,632 + MPMX26_00919 0.36 +0.7
965,704 + MPMX26_00919 0.42 +0.1
965,704 + MPMX26_00919 0.42 -0.4
965,768 + MPMX26_00919 0.47 +0.8
965,872 + MPMX26_00919 0.56 -1.5
965,968 + MPMX26_00919 0.64 +0.3
965,995 + MPMX26_00919 0.67 +0.8
965,996 + MPMX26_00919 0.67 +3.0
965,996 + MPMX26_00919 0.67 +1.5
965,996 + MPMX26_00919 0.67 +1.1
966,001 + MPMX26_00919 0.67 +0.2
966,001 + MPMX26_00919 0.67 -0.6
966,014 + MPMX26_00919 0.68 +0.4
966,014 + MPMX26_00919 0.68 +0.2
966,019 + MPMX26_00919 0.69 +0.9
966,167 + MPMX26_00919 0.81 -0.6
966,206 + MPMX26_00919 0.84 +0.7
966,415 + +0.8
966,435 + +1.4
966,435 + +1.2
966,435 + +1.2
966,525 - MPMX26_00920 0.12 +1.2
966,616 + MPMX26_00920 0.20 +1.3
966,616 + MPMX26_00920 0.20 +1.3
966,616 + MPMX26_00920 0.20 +1.3
966,616 + MPMX26_00920 0.20 +2.5
966,616 + MPMX26_00920 0.20 +1.6
966,673 + MPMX26_00920 0.25 +1.1
966,673 + MPMX26_00920 0.25 +0.5
966,673 + MPMX26_00920 0.25 +1.5
966,673 + MPMX26_00920 0.25 +1.3
966,673 + MPMX26_00920 0.25 +1.2
966,694 + MPMX26_00920 0.26 +1.2
966,694 + MPMX26_00920 0.26 +1.2
966,694 + MPMX26_00920 0.26 +0.4
966,706 + MPMX26_00920 0.27 +0.9
966,754 + MPMX26_00920 0.32 +1.3
966,925 + MPMX26_00920 0.46 +1.1
966,925 + MPMX26_00920 0.46 +2.0
966,925 + MPMX26_00920 0.46 +1.7
966,925 + MPMX26_00920 0.46 +1.1
966,925 + MPMX26_00920 0.46 +0.6
966,925 + MPMX26_00920 0.46 +1.8
966,925 + MPMX26_00920 0.46 +2.0
966,925 + MPMX26_00920 0.46 +0.4
966,925 + MPMX26_00920 0.46 +1.6
966,925 + MPMX26_00920 0.46 +1.3
966,925 + MPMX26_00920 0.46 +2.3
966,927 + MPMX26_00920 0.47 +2.2
966,927 + MPMX26_00920 0.47 +1.2
966,927 + MPMX26_00920 0.47 +1.0
966,949 + MPMX26_00920 0.49 +1.4
967,098 + MPMX26_00920 0.62 +1.3
967,098 + MPMX26_00920 0.62 +1.0
967,098 + MPMX26_00920 0.62 +1.9
967,114 + MPMX26_00920 0.63 +1.0
967,168 + MPMX26_00920 0.68 +0.5
967,168 + MPMX26_00920 0.68 +1.0
967,198 + MPMX26_00920 0.70 +0.8
967,215 + MPMX26_00920 0.72 +1.1
967,257 + MPMX26_00920 0.75 +1.0
967,369 + MPMX26_00920 0.85 +1.3
967,374 + MPMX26_00920 0.86 -0.2

Or see this region's nucleotide sequence