Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00802 and MPMX26_00803 are separated by 201 nucleotides MPMX26_00803 and MPMX26_00804 are separated by 108 nucleotides MPMX26_00804 and MPMX26_00805 are separated by 159 nucleotides
MPMX26_00802: MPMX26_00802 - hypothetical protein, at 848,608 to 848,799
_00802
MPMX26_00803: MPMX26_00803 - Hydroxyacylglutathione hydrolase, at 849,001 to 849,978
_00803
MPMX26_00804: MPMX26_00804 - hypothetical protein, at 850,087 to 850,194
_00804
MPMX26_00805: MPMX26_00805 - Multidrug efflux pump subunit AcrB, at 850,354 to 853,452
_00805
Position (kb) 849
850 Strain fitness (log2 ratio) -1
0
1
2 at 848.764 kb on + strand, within MPMX26_00802 at 849.063 kb on + strand at 849.063 kb on + strand at 849.063 kb on + strand at 849.073 kb on + strand at 849.144 kb on + strand, within MPMX26_00803 at 849.154 kb on + strand, within MPMX26_00803 at 849.243 kb on + strand, within MPMX26_00803 at 849.295 kb on + strand, within MPMX26_00803 at 849.321 kb on + strand, within MPMX26_00803 at 849.354 kb on + strand, within MPMX26_00803 at 849.361 kb on + strand, within MPMX26_00803 at 849.366 kb on + strand, within MPMX26_00803 at 849.366 kb on + strand, within MPMX26_00803 at 849.366 kb on + strand, within MPMX26_00803 at 849.372 kb on + strand, within MPMX26_00803 at 849.393 kb on + strand, within MPMX26_00803 at 849.393 kb on + strand, within MPMX26_00803 at 849.403 kb on + strand, within MPMX26_00803 at 849.417 kb on + strand, within MPMX26_00803 at 849.421 kb on + strand, within MPMX26_00803 at 849.421 kb on + strand, within MPMX26_00803 at 849.480 kb on + strand, within MPMX26_00803 at 849.517 kb on + strand, within MPMX26_00803 at 849.517 kb on + strand, within MPMX26_00803 at 849.517 kb on + strand, within MPMX26_00803 at 849.517 kb on + strand, within MPMX26_00803 at 849.517 kb on + strand, within MPMX26_00803 at 849.666 kb on + strand, within MPMX26_00803 at 849.682 kb on + strand, within MPMX26_00803 at 849.751 kb on + strand, within MPMX26_00803 at 849.751 kb on + strand, within MPMX26_00803 at 849.763 kb on + strand, within MPMX26_00803 at 849.768 kb on + strand, within MPMX26_00803 at 849.785 kb on + strand, within MPMX26_00803 at 849.787 kb on + strand, within MPMX26_00803 at 849.795 kb on + strand, within MPMX26_00803 at 849.856 kb on + strand, within MPMX26_00803 at 849.861 kb on + strand, within MPMX26_00803 at 849.875 kb on + strand, within MPMX26_00803 at 849.939 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 848,764 + MPMX26_00802 0.81 -1.6 849,063 + +1.1 849,063 + +0.1 849,063 + +1.0 849,073 + +2.0 849,144 + MPMX26_00803 0.15 +0.1 849,154 + MPMX26_00803 0.16 +0.3 849,243 + MPMX26_00803 0.25 -1.2 849,295 + MPMX26_00803 0.30 -1.3 849,321 + MPMX26_00803 0.33 -0.0 849,354 + MPMX26_00803 0.36 +1.2 849,361 + MPMX26_00803 0.37 -1.0 849,366 + MPMX26_00803 0.37 +1.1 849,366 + MPMX26_00803 0.37 -0.1 849,366 + MPMX26_00803 0.37 +0.5 849,372 + MPMX26_00803 0.38 +1.2 849,393 + MPMX26_00803 0.40 +0.1 849,393 + MPMX26_00803 0.40 +0.9 849,403 + MPMX26_00803 0.41 +0.8 849,417 + MPMX26_00803 0.43 +1.2 849,421 + MPMX26_00803 0.43 +0.8 849,421 + MPMX26_00803 0.43 +0.8 849,480 + MPMX26_00803 0.49 +0.7 849,517 + MPMX26_00803 0.53 +0.9 849,517 + MPMX26_00803 0.53 +0.3 849,517 + MPMX26_00803 0.53 +1.0 849,517 + MPMX26_00803 0.53 -0.4 849,517 + MPMX26_00803 0.53 +0.1 849,666 + MPMX26_00803 0.68 +0.2 849,682 + MPMX26_00803 0.70 +0.0 849,751 + MPMX26_00803 0.77 -0.2 849,751 + MPMX26_00803 0.77 -0.2 849,763 + MPMX26_00803 0.78 -0.1 849,768 + MPMX26_00803 0.78 -0.1 849,785 + MPMX26_00803 0.80 +0.1 849,787 + MPMX26_00803 0.80 +0.1 849,795 + MPMX26_00803 0.81 -1.6 849,856 + MPMX26_00803 0.87 +0.1 849,861 + MPMX26_00803 0.88 -0.2 849,875 + MPMX26_00803 0.89 +1.4 849,939 + -0.9
Or see this region's nucleotide sequence