Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00449

Experiment: L-Proline (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00447 and MPMX26_00448 are separated by 2 nucleotidesMPMX26_00448 and MPMX26_00449 are separated by 12 nucleotidesMPMX26_00449 and MPMX26_00450 are separated by 135 nucleotides MPMX26_00447: MPMX26_00447 - Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, at 480,781 to 481,590 _00447 MPMX26_00448: MPMX26_00448 - hypothetical protein, at 481,593 to 482,576 _00448 MPMX26_00449: MPMX26_00449 - hypothetical protein, at 482,589 to 483,632 _00449 MPMX26_00450: MPMX26_00450 - dTDP-glucose 4,6-dehydratase 2, at 483,768 to 484,835 _00450 Position (kb) 482 483 484Strain fitness (log2 ratio) -1 0 1 2at 481.643 kb on + strandat 481.703 kb on + strand, within MPMX26_00448at 481.710 kb on + strand, within MPMX26_00448at 481.808 kb on + strand, within MPMX26_00448at 481.808 kb on + strand, within MPMX26_00448at 481.808 kb on + strand, within MPMX26_00448at 481.813 kb on + strand, within MPMX26_00448at 481.827 kb on + strand, within MPMX26_00448at 481.834 kb on + strand, within MPMX26_00448at 481.862 kb on + strand, within MPMX26_00448at 481.868 kb on + strand, within MPMX26_00448at 481.892 kb on + strand, within MPMX26_00448at 481.896 kb on + strand, within MPMX26_00448at 481.987 kb on + strand, within MPMX26_00448at 482.011 kb on + strand, within MPMX26_00448at 482.018 kb on + strand, within MPMX26_00448at 482.036 kb on + strand, within MPMX26_00448at 482.107 kb on + strand, within MPMX26_00448at 482.169 kb on + strand, within MPMX26_00448at 482.185 kb on + strand, within MPMX26_00448at 482.207 kb on + strand, within MPMX26_00448at 482.273 kb on + strand, within MPMX26_00448at 482.279 kb on + strand, within MPMX26_00448at 482.301 kb on + strand, within MPMX26_00448at 482.314 kb on + strand, within MPMX26_00448at 482.315 kb on + strand, within MPMX26_00448at 482.332 kb on + strand, within MPMX26_00448at 482.339 kb on + strand, within MPMX26_00448at 482.339 kb on + strand, within MPMX26_00448at 482.350 kb on + strand, within MPMX26_00448at 482.359 kb on + strand, within MPMX26_00448at 482.384 kb on + strand, within MPMX26_00448at 482.452 kb on + strand, within MPMX26_00448at 482.460 kb on + strand, within MPMX26_00448at 482.489 kb on + strandat 482.489 kb on + strandat 482.489 kb on + strandat 482.489 kb on + strandat 482.489 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.544 kb on + strandat 482.571 kb on + strandat 482.576 kb on + strandat 482.627 kb on + strandat 482.659 kb on + strandat 482.690 kb on + strandat 482.690 kb on + strandat 482.690 kb on + strandat 482.710 kb on + strand, within MPMX26_00449at 482.742 kb on + strand, within MPMX26_00449at 482.742 kb on + strand, within MPMX26_00449at 482.802 kb on + strand, within MPMX26_00449at 482.803 kb on + strand, within MPMX26_00449at 482.803 kb on + strand, within MPMX26_00449at 482.815 kb on + strand, within MPMX26_00449at 482.817 kb on + strand, within MPMX26_00449at 482.863 kb on + strand, within MPMX26_00449at 482.863 kb on + strand, within MPMX26_00449at 482.880 kb on + strand, within MPMX26_00449at 483.000 kb on + strand, within MPMX26_00449at 483.054 kb on + strand, within MPMX26_00449at 483.134 kb on + strand, within MPMX26_00449at 483.134 kb on + strand, within MPMX26_00449at 483.134 kb on + strand, within MPMX26_00449at 483.175 kb on + strand, within MPMX26_00449at 483.210 kb on + strand, within MPMX26_00449at 483.216 kb on + strand, within MPMX26_00449at 483.319 kb on + strand, within MPMX26_00449at 483.319 kb on + strand, within MPMX26_00449at 483.319 kb on + strand, within MPMX26_00449at 483.330 kb on + strand, within MPMX26_00449at 483.330 kb on + strand, within MPMX26_00449at 483.422 kb on + strand, within MPMX26_00449at 483.453 kb on + strand, within MPMX26_00449at 483.458 kb on + strand, within MPMX26_00449at 483.484 kb on - strand, within MPMX26_00449at 483.504 kb on + strand, within MPMX26_00449at 483.504 kb on + strand, within MPMX26_00449at 483.550 kb on + strandat 483.561 kb on + strandat 483.561 kb on + strandat 483.561 kb on + strandat 483.561 kb on + strandat 483.670 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.680 kb on + strandat 483.696 kb on + strandat 483.696 kb on + strandat 483.696 kb on + strandat 483.773 kb on + strandat 483.773 kb on + strandat 483.942 kb on + strand, within MPMX26_00450at 483.950 kb on + strand, within MPMX26_00450at 483.950 kb on + strand, within MPMX26_00450at 483.957 kb on + strand, within MPMX26_00450at 483.957 kb on + strand, within MPMX26_00450at 484.097 kb on + strand, within MPMX26_00450at 484.116 kb on + strand, within MPMX26_00450at 484.172 kb on + strand, within MPMX26_00450at 484.172 kb on + strand, within MPMX26_00450at 484.172 kb on + strand, within MPMX26_00450at 484.173 kb on + strand, within MPMX26_00450at 484.184 kb on + strand, within MPMX26_00450at 484.190 kb on + strand, within MPMX26_00450at 484.190 kb on + strand, within MPMX26_00450at 484.192 kb on + strand, within MPMX26_00450at 484.234 kb on + strand, within MPMX26_00450at 484.234 kb on + strand, within MPMX26_00450at 484.268 kb on + strand, within MPMX26_00450at 484.269 kb on + strand, within MPMX26_00450at 484.269 kb on + strand, within MPMX26_00450at 484.286 kb on + strand, within MPMX26_00450at 484.286 kb on + strand, within MPMX26_00450at 484.292 kb on + strand, within MPMX26_00450at 484.308 kb on + strand, within MPMX26_00450at 484.308 kb on + strand, within MPMX26_00450at 484.310 kb on + strand, within MPMX26_00450at 484.333 kb on + strand, within MPMX26_00450at 484.389 kb on + strand, within MPMX26_00450at 484.394 kb on + strand, within MPMX26_00450at 484.400 kb on + strand, within MPMX26_00450at 484.405 kb on + strand, within MPMX26_00450at 484.408 kb on + strand, within MPMX26_00450at 484.410 kb on + strand, within MPMX26_00450at 484.410 kb on + strand, within MPMX26_00450at 484.410 kb on + strand, within MPMX26_00450at 484.449 kb on + strand, within MPMX26_00450at 484.455 kb on + strand, within MPMX26_00450at 484.470 kb on + strand, within MPMX26_00450at 484.472 kb on + strand, within MPMX26_00450at 484.491 kb on + strand, within MPMX26_00450at 484.492 kb on + strand, within MPMX26_00450at 484.541 kb on + strand, within MPMX26_00450at 484.595 kb on + strand, within MPMX26_00450at 484.595 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450at 484.603 kb on + strand, within MPMX26_00450

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
remove
481,643 + +1.1
481,703 + MPMX26_00448 0.11 +0.2
481,710 + MPMX26_00448 0.12 +0.4
481,808 + MPMX26_00448 0.22 +1.3
481,808 + MPMX26_00448 0.22 +0.0
481,808 + MPMX26_00448 0.22 +1.5
481,813 + MPMX26_00448 0.22 +0.8
481,827 + MPMX26_00448 0.24 -0.3
481,834 + MPMX26_00448 0.24 +0.9
481,862 + MPMX26_00448 0.27 +1.1
481,868 + MPMX26_00448 0.28 +0.3
481,892 + MPMX26_00448 0.30 -0.9
481,896 + MPMX26_00448 0.31 -0.1
481,987 + MPMX26_00448 0.40 +1.0
482,011 + MPMX26_00448 0.42 +1.3
482,018 + MPMX26_00448 0.43 +0.5
482,036 + MPMX26_00448 0.45 +0.6
482,107 + MPMX26_00448 0.52 +0.7
482,169 + MPMX26_00448 0.59 +0.4
482,185 + MPMX26_00448 0.60 -1.6
482,207 + MPMX26_00448 0.62 -0.2
482,273 + MPMX26_00448 0.69 +1.2
482,279 + MPMX26_00448 0.70 +0.2
482,301 + MPMX26_00448 0.72 -0.0
482,314 + MPMX26_00448 0.73 +0.9
482,315 + MPMX26_00448 0.73 +1.4
482,332 + MPMX26_00448 0.75 +0.1
482,339 + MPMX26_00448 0.76 -0.2
482,339 + MPMX26_00448 0.76 +1.0
482,350 + MPMX26_00448 0.77 +1.0
482,359 + MPMX26_00448 0.78 -0.8
482,384 + MPMX26_00448 0.80 +0.1
482,452 + MPMX26_00448 0.87 +0.4
482,460 + MPMX26_00448 0.88 +0.8
482,489 + +1.0
482,489 + +0.7
482,489 + +0.3
482,489 + +0.3
482,489 + +2.1
482,544 + +0.8
482,544 + +0.9
482,544 + +1.6
482,544 + +0.7
482,544 + +0.7
482,544 + +0.5
482,544 + +0.5
482,571 + -0.4
482,576 + +1.5
482,627 + +0.4
482,659 + +0.4
482,690 + +0.5
482,690 + +0.7
482,690 + +0.8
482,710 + MPMX26_00449 0.12 +0.6
482,742 + MPMX26_00449 0.15 +0.8
482,742 + MPMX26_00449 0.15 +0.6
482,802 + MPMX26_00449 0.20 +1.1
482,803 + MPMX26_00449 0.20 +0.7
482,803 + MPMX26_00449 0.20 +0.1
482,815 + MPMX26_00449 0.22 +0.5
482,817 + MPMX26_00449 0.22 +0.4
482,863 + MPMX26_00449 0.26 +0.3
482,863 + MPMX26_00449 0.26 +1.1
482,880 + MPMX26_00449 0.28 +0.8
483,000 + MPMX26_00449 0.39 +0.5
483,054 + MPMX26_00449 0.45 +0.4
483,134 + MPMX26_00449 0.52 +0.8
483,134 + MPMX26_00449 0.52 +0.7
483,134 + MPMX26_00449 0.52 +0.9
483,175 + MPMX26_00449 0.56 +0.7
483,210 + MPMX26_00449 0.59 +0.8
483,216 + MPMX26_00449 0.60 +0.7
483,319 + MPMX26_00449 0.70 -0.9
483,319 + MPMX26_00449 0.70 +0.3
483,319 + MPMX26_00449 0.70 +0.8
483,330 + MPMX26_00449 0.71 +1.1
483,330 + MPMX26_00449 0.71 +0.3
483,422 + MPMX26_00449 0.80 +0.4
483,453 + MPMX26_00449 0.83 +0.7
483,458 + MPMX26_00449 0.83 +0.7
483,484 - MPMX26_00449 0.86 +0.7
483,504 + MPMX26_00449 0.88 +0.4
483,504 + MPMX26_00449 0.88 +0.6
483,550 + +0.5
483,561 + +0.1
483,561 + -0.0
483,561 + -0.1
483,561 + +0.2
483,670 + -0.3
483,680 + +0.1
483,680 + +0.2
483,680 + -0.5
483,680 + -0.1
483,680 + -0.2
483,680 + -0.3
483,680 + -0.5
483,680 + -1.6
483,680 + -0.9
483,696 + +0.0
483,696 + -1.2
483,696 + -1.3
483,773 + +0.2
483,773 + -0.4
483,942 + MPMX26_00450 0.16 +0.4
483,950 + MPMX26_00450 0.17 +0.1
483,950 + MPMX26_00450 0.17 -0.7
483,957 + MPMX26_00450 0.18 -0.9
483,957 + MPMX26_00450 0.18 -0.0
484,097 + MPMX26_00450 0.31 -0.1
484,116 + MPMX26_00450 0.33 +0.0
484,172 + MPMX26_00450 0.38 -0.1
484,172 + MPMX26_00450 0.38 -1.1
484,172 + MPMX26_00450 0.38 +0.6
484,173 + MPMX26_00450 0.38 -0.3
484,184 + MPMX26_00450 0.39 +0.1
484,190 + MPMX26_00450 0.40 -1.3
484,190 + MPMX26_00450 0.40 -0.2
484,192 + MPMX26_00450 0.40 -0.3
484,234 + MPMX26_00450 0.44 -0.5
484,234 + MPMX26_00450 0.44 -0.2
484,268 + MPMX26_00450 0.47 -0.2
484,269 + MPMX26_00450 0.47 +0.2
484,269 + MPMX26_00450 0.47 +0.2
484,286 + MPMX26_00450 0.49 +0.3
484,286 + MPMX26_00450 0.49 +0.3
484,292 + MPMX26_00450 0.49 -0.2
484,308 + MPMX26_00450 0.51 +0.4
484,308 + MPMX26_00450 0.51 -0.8
484,310 + MPMX26_00450 0.51 +0.1
484,333 + MPMX26_00450 0.53 -1.2
484,389 + MPMX26_00450 0.58 -0.5
484,394 + MPMX26_00450 0.59 -0.4
484,400 + MPMX26_00450 0.59 +0.0
484,405 + MPMX26_00450 0.60 -1.5
484,408 + MPMX26_00450 0.60 +0.2
484,410 + MPMX26_00450 0.60 +0.3
484,410 + MPMX26_00450 0.60 -0.8
484,410 + MPMX26_00450 0.60 -0.4
484,449 + MPMX26_00450 0.64 -0.7
484,455 + MPMX26_00450 0.64 -0.8
484,470 + MPMX26_00450 0.66 +0.2
484,472 + MPMX26_00450 0.66 -0.1
484,491 + MPMX26_00450 0.68 -1.5
484,492 + MPMX26_00450 0.68 -0.4
484,541 + MPMX26_00450 0.72 -0.5
484,595 + MPMX26_00450 0.77 -0.1
484,595 + MPMX26_00450 0.77 -0.2
484,603 + MPMX26_00450 0.78 -0.5
484,603 + MPMX26_00450 0.78 -0.5
484,603 + MPMX26_00450 0.78 -0.5
484,603 + MPMX26_00450 0.78 +0.1
484,603 + MPMX26_00450 0.78 -0.4
484,603 + MPMX26_00450 0.78 -1.3
484,603 + MPMX26_00450 0.78 +0.3
484,603 + MPMX26_00450 0.78 -0.2
484,603 + MPMX26_00450 0.78 -0.6
484,603 + MPMX26_00450 0.78 +0.1
484,603 + MPMX26_00450 0.78 +0.3
484,603 + MPMX26_00450 0.78 -0.2
484,603 + MPMX26_00450 0.78 -0.7
484,603 + MPMX26_00450 0.78 +1.8
484,603 + MPMX26_00450 0.78 +0.5
484,603 + MPMX26_00450 0.78 -0.6
484,603 + MPMX26_00450 0.78 -0.5
484,603 + MPMX26_00450 0.78 -0.3
484,603 + MPMX26_00450 0.78 +0.5

Or see this region's nucleotide sequence