Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5761

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,785,390	+				+0.3
2,785,390	+				-0.2
2,785,391	-				-0.8
2,785,510	-				+0.3
2,785,514	+				-0.0
2,785,514	+				-0.2
2,785,514	+				-0.6
2,785,514	+				+0.5
2,785,532	+				-1.0
2,785,737	+		GFF5760	0.28	-0.9
2,785,962	+		GFF5760	0.61	-0.1
2,785,963	-		GFF5760	0.61	-1.2
2,786,067	+		GFF5760	0.77	-0.6
2,786,067	+		GFF5760	0.77	-0.0
2,786,067	+		GFF5760	0.77	-0.2
2,786,067	+		GFF5760	0.77	+0.9
2,786,067	+		GFF5760	0.77	-0.6
2,786,067	+		GFF5760	0.77	+0.3
2,786,067	+		GFF5760	0.77	+0.2
2,786,067	+		GFF5760	0.77	-0.1
2,786,067	+		GFF5760	0.77	-0.2
2,786,067	+		GFF5760	0.77	-0.1
2,786,067	+		GFF5760	0.77	+0.2
2,786,068	-		GFF5760	0.77	-0.3
2,786,068	-		GFF5760	0.77	+0.1
2,786,068	-		GFF5760	0.77	+0.6
2,786,068	-		GFF5760	0.77	-0.2
2,786,068	-		GFF5760	0.77	-0.1
2,786,068	-		GFF5760	0.77	+0.6
2,786,068	-		GFF5760	0.77	-0.4
2,786,381	+		GFF5761	0.14	+0.4
2,786,382	-		GFF5761	0.14	-0.5
2,786,382	-		GFF5761	0.14	-0.2
2,786,382	-		GFF5761	0.14	-0.5
2,787,062	+		GFF5761	0.73	-0.9
2,787,188	+		GFF5761	0.84	-0.2
2,787,188	+		GFF5761	0.84	-0.7
2,787,189	-		GFF5761	0.84	-0.0
2,787,189	-		GFF5761	0.84	-0.4
2,787,638	+				-0.7
2,787,638	+				+0.4
2,787,638	+				-0.1
2,787,639	-				+0.5
2,788,220	+		GFF5762	0.26	-0.4
2,788,221	-		GFF5762	0.26	-0.1