Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5481

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,481,230	+				-0.7
2,481,231	-				-0.3
2,481,231	-				-1.2
2,481,270	+				-0.2
2,481,322	+				-0.6
2,481,322	+				+0.8
2,481,323	-				-0.9
2,481,323	-				+0.1
2,481,323	-				-0.0
2,481,323	-				+2.2
2,481,323	-				+0.9
2,481,356	-				-0.1
2,481,473	-		GFF5480	0.33	-0.0
2,481,544	+		GFF5480	0.47	+0.4
2,481,544	+		GFF5480	0.47	+0.6
2,481,545	-		GFF5480	0.48	+1.6
2,481,545	-		GFF5480	0.48	+0.2
2,481,545	-		GFF5480	0.48	+0.2
2,481,547	+		GFF5480	0.48	-0.0
2,481,548	-		GFF5480	0.48	-0.4
2,481,548	-		GFF5480	0.48	+0.4
2,481,548	-		GFF5480	0.48	-0.8
2,481,670	+		GFF5480	0.73	+1.8
2,481,737	-		GFF5480	0.87	+0.7
2,481,746	-		GFF5480	0.89	-0.3
2,481,746	-		GFF5480	0.89	+0.2
2,481,746	-		GFF5480	0.89	-0.3
2,481,828	+				-0.1
2,481,834	+				-0.2
2,481,834	+				+0.2
2,481,834	+				-0.4
2,481,834	+				-1.0
2,481,834	+				+0.6
2,481,834	+				+0.1
2,481,835	-				-0.0
2,481,835	-				-0.0
2,481,835	-				-0.1
2,481,835	-				+0.6
2,482,510	-		GFF5481	0.56	-0.4
2,482,720	-		GFF5481	0.72	-0.3
2,482,720	-		GFF5481	0.72	+0.3
2,482,720	-		GFF5481	0.72	+0.7
2,482,720	-		GFF5481	0.72	-0.1
2,482,881	+		GFF5481	0.85	-0.1
2,482,881	+		GFF5481	0.85	-0.2
2,482,881	+		GFF5481	0.85	+0.2
2,482,920	+		GFF5481	0.88	+0.2
2,482,920	+		GFF5481	0.88	-0.2
2,482,921	-		GFF5481	0.88	-1.7
2,482,936	+		GFF5481	0.89	+0.0
2,482,938	+		GFF5481	0.89	+0.9
2,482,938	+		GFF5481	0.89	-0.1
2,482,938	+		GFF5481	0.89	-1.6
2,482,939	-		GFF5481	0.90	+1.0
2,482,984	-				+0.3
2,483,106	+				+0.0
2,483,122	-				-0.7
2,483,122	-				-0.6
2,483,382	+		GFF5482	0.30	-0.7
2,483,383	-		GFF5482	0.30	+0.3
2,483,502	+		GFF5482	0.42	-0.3
2,483,565	+		GFF5482	0.48	-0.7
2,483,566	-		GFF5482	0.48	-0.1
2,483,643	+		GFF5482	0.56	-0.0
2,483,979	+				-0.0
2,483,979	+				-1.4
2,483,979	+				+0.5
2,483,980	-				+0.3
2,483,980	-				-0.2
2,483,980	-				-0.8
2,483,980	-				-0.2
2,484,060	+				+1.2
2,484,062	+				-0.1
2,484,062	+				+0.7
2,484,062	+				-0.3
2,484,063	-				+0.2
2,484,063	-				-0.4