Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4267

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,191,790	-				+0.4
1,191,857	+				-0.1
1,191,858	+				+0.5
1,191,858	-				-0.9
1,191,858	-				+0.2
1,192,031	-		GFF4266	0.26	-0.2
1,192,031	-		GFF4266	0.26	-0.1
1,192,031	-		GFF4266	0.26	+1.2
1,192,072	+		GFF4266	0.32	-0.1
1,192,072	+		GFF4266	0.32	+0.7
1,192,072	+		GFF4266	0.32	+0.3
1,192,073	-		GFF4266	0.32	+1.0
1,192,168	+		GFF4266	0.48	-0.3
1,192,182	-		GFF4266	0.50	-0.6
1,192,223	+		GFF4266	0.56	+0.9
1,192,604	+				+1.0
1,192,685	+				-0.2
1,192,685	+				+0.5
1,192,685	+				-0.4
1,192,686	-				-0.2
1,192,686	-				-0.3
1,192,686	-				+0.4
1,192,686	-				-0.7
1,192,686	-				+0.7
1,192,725	+		GFF4267	0.10	-0.4
1,192,892	+		GFF4267	0.19	+0.2
1,192,892	+		GFF4267	0.19	-1.5
1,192,893	-		GFF4267	0.19	+0.5
1,193,012	+		GFF4267	0.24	-0.7
1,193,012	+		GFF4267	0.24	-0.1
1,193,013	-		GFF4267	0.24	-0.4
1,193,013	-		GFF4267	0.24	-0.3
1,193,087	+		GFF4267	0.28	-0.3
1,193,087	+		GFF4267	0.28	+0.0
1,193,088	-		GFF4267	0.28	+0.4
1,193,088	-		GFF4267	0.28	-0.7
1,193,088	-		GFF4267	0.28	+0.5
1,193,108	+		GFF4267	0.29	+0.0
1,193,109	-		GFF4267	0.29	-0.6
1,193,156	+		GFF4267	0.31	+0.8
1,193,345	+		GFF4267	0.40	+0.2
1,193,346	-		GFF4267	0.41	+0.5
1,193,346	-		GFF4267	0.41	-0.0
1,193,363	+		GFF4267	0.41	-0.2
1,193,364	-		GFF4267	0.41	+1.6
1,193,364	-		GFF4267	0.41	-0.2
1,193,364	-		GFF4267	0.41	+0.1
1,193,364	-		GFF4267	0.41	-0.5
1,193,510	+		GFF4267	0.48	-0.4
1,193,511	-		GFF4267	0.48	+1.3
1,193,511	-		GFF4267	0.48	+0.7
1,193,681	+		GFF4267	0.57	-1.4
1,193,681	+		GFF4267	0.57	-0.4
1,193,682	-		GFF4267	0.57	-0.5
1,193,682	-		GFF4267	0.57	-0.5
1,193,682	-		GFF4267	0.57	+0.2
1,193,855	+		GFF4267	0.65	-0.2
1,193,855	+		GFF4267	0.65	-0.7
1,193,856	-		GFF4267	0.65	+0.4
1,193,856	-		GFF4267	0.65	+0.6
1,193,856	-		GFF4267	0.65	-0.8
1,193,856	-		GFF4267	0.65	-0.2
1,193,856	-		GFF4267	0.65	-0.2
1,193,856	-		GFF4267	0.65	+0.2
1,194,038	+		GFF4267	0.74	-0.2
1,194,404	+				-0.2
1,194,404	+				+0.8
1,194,404	+				+0.2
1,194,405	-				+1.6
1,194,405	-				+0.1
1,194,420	-				-0.4
1,194,420	-				+1.6
1,194,420	-				-0.4
1,194,420	-				+0.5
1,194,515	+				-0.2
1,194,515	+				+1.6
1,194,516	-				+0.0
1,194,580	+				+0.3
1,194,580	+				+0.2
1,194,580	+				+1.2
1,194,580	+				+1.8
1,194,580	+				-1.7
1,194,580	+				+0.7
1,194,580	+				-0.2
1,194,581	-				-0.2
1,194,581	-				+0.1
1,194,767	+				-0.3
1,194,785	+				-0.7
1,195,474	+				-0.3
1,195,474	+				-2.3
1,195,474	+				+1.0
1,195,474	+				-1.6
1,195,474	+				-0.2
1,195,474	+				-1.2
1,195,474	+				+0.1
1,195,475	-				+0.0
1,195,475	-				+0.3