Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF422

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
92,414	+				+0.0
92,414	+				+0.2
92,414	+				-0.2
92,414	+				-1.0
92,415	-				-0.2
92,472	-				-1.2
92,929	+		GFF421	0.48	-0.3
92,929	+		GFF421	0.48	-0.4
93,089	-		GFF421	0.66	+1.6
93,131	-		GFF421	0.71	+0.5
93,368	-				-0.2
93,368	-				+0.2
93,540	+		GFF422	0.14	+0.0
93,574	-		GFF422	0.18	-0.2
94,191	+		GFF422	0.86	+0.2
94,192	-		GFF422	0.86	+0.6
94,538	+		GFF423	0.21	+0.0
94,539	-		GFF423	0.21	-0.6
95,084	+		GFF423	0.73	+0.8
95,193	-		GFF423	0.84	+0.2
95,279	+				-0.1
95,280	-				+0.1
95,280	-				-0.2