Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF344

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
4,384	+		GFF343	0.49	-0.0
4,384	+		GFF343	0.49	-0.1
4,384	+		GFF343	0.49	-0.3
4,384	+		GFF343	0.49	-0.1
4,624	+		GFF343	0.70	-0.2
4,625	-		GFF343	0.70	-0.7
5,204	+		GFF344	0.17	-0.3
5,204	+		GFF344	0.17	-1.6
5,204	+		GFF344	0.17	+0.7
5,205	-		GFF344	0.17	-0.6
5,205	-		GFF344	0.17	-0.1
5,378	+		GFF344	0.30	+0.5
5,378	+		GFF344	0.30	-0.8
6,338	+				+0.3
6,641	+		GFF345	0.16	-0.2
6,642	-		GFF345	0.16	+0.5
6,642	-		GFF345	0.16	-0.3
6,642	-		GFF345	0.16	-0.5
6,642	-		GFF345	0.16	-0.2
7,022	+		GFF345	0.46	+0.6