Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3227

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
109,728	+		GFF3226	0.59	-0.2
109,911	+		GFF3226	0.72	-0.4
109,911	+		GFF3226	0.72	+0.0
109,912	-		GFF3226	0.72	+0.4
109,912	-		GFF3226	0.72	-0.5
110,038	-		GFF3226	0.82	-2.1
110,321	+				+0.6
110,500	+				-0.4
110,512	+				-0.1
110,512	+				-0.2
110,664	-				-0.1
110,805	-		GFF3227	0.54	-0.2
110,870	+		GFF3227	0.84	-0.6
110,870	+		GFF3227	0.84	-2.1
110,873	-		GFF3227	0.85	+0.0
110,873	-		GFF3227	0.85	+0.1
110,944	+				+0.8
111,176	+		GFF3228	0.21	+0.4
111,230	+		GFF3228	0.26	-0.1
111,362	+		GFF3228	0.38	-0.0
111,797	+		GFF3228	0.78	-0.5