Strain Fitness in Escherichia fergusonii Becca around EFB2_04621

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
4,855,223	+				+0.6
4,855,223	+				-0.2
4,855,224	-				+0.7
4,855,224	-				+1.2
4,855,230	+				-0.4
4,855,230	+				-0.9
4,855,232	+				+0.6
4,855,233	-				+0.6
4,855,233	-				-0.5
4,855,304	+		EFB2_04619	0.13	-0.1
4,855,325	+		EFB2_04619	0.16	+0.3
4,855,325	+		EFB2_04619	0.16	+0.4
4,855,325	+		EFB2_04619	0.16	+0.4
4,855,326	-		EFB2_04619	0.16	-0.5
4,855,339	+		EFB2_04619	0.18	+0.1
4,855,340	-		EFB2_04619	0.18	+0.7
4,855,340	-		EFB2_04619	0.18	-2.3
4,855,341	+		EFB2_04619	0.18	-0.1
4,855,341	+		EFB2_04619	0.18	-0.4
4,855,341	+		EFB2_04619	0.18	-0.5
4,855,342	-		EFB2_04619	0.18	+0.4
4,855,342	-		EFB2_04619	0.18	+0.6
4,855,342	-		EFB2_04619	0.18	-0.9
4,855,342	-		EFB2_04619	0.18	-0.1
4,855,342	-		EFB2_04619	0.18	+0.5
4,855,342	-		EFB2_04619	0.18	-0.2
4,855,342	-		EFB2_04619	0.18	-0.6
4,855,373	-		EFB2_04619	0.22	+0.3
4,855,373	-		EFB2_04619	0.22	-0.3
4,855,399	+		EFB2_04619	0.26	-0.4
4,855,399	+		EFB2_04619	0.26	-0.6
4,855,399	+		EFB2_04619	0.26	+1.8
4,855,399	+		EFB2_04619	0.26	-0.1
4,855,399	+		EFB2_04619	0.26	-1.2
4,855,399	+		EFB2_04619	0.26	+0.2
4,855,400	-		EFB2_04619	0.26	+0.5
4,855,400	-		EFB2_04619	0.26	-0.3
4,855,400	-		EFB2_04619	0.26	+2.3
4,855,400	-		EFB2_04619	0.26	+0.4
4,855,400	-		EFB2_04619	0.26	-1.0
4,855,400	-		EFB2_04619	0.26	-0.4
4,855,400	-		EFB2_04619	0.26	+0.9
4,855,400	-		EFB2_04619	0.26	-1.3
4,855,400	-		EFB2_04619	0.26	-0.3
4,855,400	-		EFB2_04619	0.26	-0.1
4,855,400	-		EFB2_04619	0.26	-1.9
4,855,428	-		EFB2_04619	0.29	-1.7
4,855,439	+		EFB2_04619	0.31	+0.1
4,855,440	-		EFB2_04619	0.31	-1.5
4,855,440	-		EFB2_04619	0.31	+1.4
4,855,513	+		EFB2_04619	0.41	-0.3
4,855,513	+		EFB2_04619	0.41	-0.0
4,855,513	+		EFB2_04619	0.41	+0.5
4,855,513	+		EFB2_04619	0.41	+0.2
4,855,513	+		EFB2_04619	0.41	-1.8
4,855,513	+		EFB2_04619	0.41	-0.5
4,855,513	+		EFB2_04619	0.41	+0.2
4,855,513	+		EFB2_04619	0.41	+0.7
4,855,513	+		EFB2_04619	0.41	-0.3
4,855,513	+		EFB2_04619	0.41	-0.5
4,855,513	+		EFB2_04619	0.41	+2.4
4,855,513	+		EFB2_04619	0.41	+0.0
4,855,513	+		EFB2_04619	0.41	-2.3
4,855,513	+		EFB2_04619	0.41	-2.2
4,855,513	+		EFB2_04619	0.41	+1.4
4,855,513	+		EFB2_04619	0.41	-0.6
4,855,513	+		EFB2_04619	0.41	+0.4
4,855,513	+		EFB2_04619	0.41	+0.1
4,855,513	+		EFB2_04619	0.41	+1.9
4,855,514	-		EFB2_04619	0.41	-0.8
4,855,514	-		EFB2_04619	0.41	+0.7
4,855,514	-		EFB2_04619	0.41	-0.1
4,855,514	-		EFB2_04619	0.41	+0.8
4,855,514	-		EFB2_04619	0.41	-0.4
4,855,514	-		EFB2_04619	0.41	-1.2
4,855,514	-		EFB2_04619	0.41	+0.9
4,855,514	-		EFB2_04619	0.41	-0.5
4,855,514	-		EFB2_04619	0.41	+1.4
4,855,514	-		EFB2_04619	0.41	+1.6
4,855,514	-		EFB2_04619	0.41	-2.5
4,855,514	-		EFB2_04619	0.41	-0.9
4,855,541	-		EFB2_04619	0.44	-2.3
4,855,580	+		EFB2_04619	0.49	+1.8
4,855,581	-		EFB2_04619	0.50	+0.7
4,855,589	+		EFB2_04619	0.51	+0.2
4,855,589	+		EFB2_04619	0.51	+0.5
4,855,590	-		EFB2_04619	0.51	-0.3
4,855,590	-		EFB2_04619	0.51	+1.8
4,855,610	+		EFB2_04619	0.53	-1.4
4,855,610	+		EFB2_04619	0.53	-1.3
4,855,610	+		EFB2_04619	0.53	+0.5
4,855,611	-		EFB2_04619	0.54	+1.6
4,855,611	-		EFB2_04619	0.54	-0.1
4,855,643	+		EFB2_04619	0.58	+0.4
4,855,643	+		EFB2_04619	0.58	+0.3
4,855,643	+		EFB2_04619	0.58	-1.5
4,855,644	-		EFB2_04619	0.58	+0.2
4,855,644	-		EFB2_04619	0.58	-1.0
4,855,684	+		EFB2_04619	0.63	+0.8
4,855,684	+		EFB2_04619	0.63	+0.4
4,855,684	+		EFB2_04619	0.63	-0.7
4,855,684	+		EFB2_04619	0.63	+0.7
4,855,685	-		EFB2_04619	0.63	-1.9
4,855,685	-		EFB2_04619	0.63	+0.5
4,855,713	+		EFB2_04619	0.67	-1.6
4,855,713	+		EFB2_04619	0.67	-0.4
4,855,713	+		EFB2_04619	0.67	+1.3
4,855,734	-		EFB2_04619	0.70	+0.7
4,855,734	-		EFB2_04619	0.70	-1.5
4,855,804	+		EFB2_04619	0.79	-1.1
4,855,804	+		EFB2_04619	0.79	-1.3
4,855,805	-		EFB2_04619	0.79	+0.2
4,855,805	-		EFB2_04619	0.79	-1.5
4,855,805	-		EFB2_04619	0.79	+0.3
4,855,805	-		EFB2_04619	0.79	-2.3
4,855,805	-		EFB2_04619	0.79	+0.9
4,855,823	+		EFB2_04619	0.82	-0.3
4,855,823	+		EFB2_04619	0.82	-0.4
4,855,823	+		EFB2_04619	0.82	+0.7
4,855,823	+		EFB2_04619	0.82	-1.3
4,855,824	-		EFB2_04619	0.82	+0.5
4,855,824	-		EFB2_04619	0.82	+0.6
4,855,824	-		EFB2_04619	0.82	+0.2
4,855,824	-		EFB2_04619	0.82	-0.7
4,855,824	-		EFB2_04619	0.82	-1.2
4,855,824	-		EFB2_04619	0.82	-0.2
4,855,828	+		EFB2_04619	0.82	+0.3
4,855,828	+		EFB2_04619	0.82	+0.8
4,855,828	+		EFB2_04619	0.82	-0.2
4,855,828	+		EFB2_04619	0.82	+2.1
4,855,829	-		EFB2_04619	0.82	+0.5
4,855,829	-		EFB2_04619	0.82	-1.1
4,855,829	-		EFB2_04619	0.82	+1.0
4,855,829	-		EFB2_04619	0.82	-0.2
4,855,829	-		EFB2_04619	0.82	-0.2
4,855,831	+		EFB2_04619	0.83	+1.0
4,855,832	-		EFB2_04619	0.83	-0.6
4,855,832	-		EFB2_04619	0.83	+1.4
4,855,840	+		EFB2_04619	0.84	-3.6
4,855,840	+		EFB2_04619	0.84	+0.5
4,855,840	+		EFB2_04619	0.84	-0.3
4,855,840	+		EFB2_04619	0.84	+0.3
4,855,840	+		EFB2_04619	0.84	-0.8
4,855,841	-		EFB2_04619	0.84	+1.7
4,855,841	-		EFB2_04619	0.84	+0.5
4,855,841	-		EFB2_04619	0.84	+0.4
4,855,841	-		EFB2_04619	0.84	-1.6
4,855,841	-		EFB2_04619	0.84	-0.0
4,855,930	+				+0.6
4,855,991	+		EFB2_04620	0.23	-0.2
4,855,991	+		EFB2_04620	0.23	+2.4
4,855,991	+		EFB2_04620	0.23	-0.0
4,855,991	+		EFB2_04620	0.23	+0.6
4,855,991	+		EFB2_04620	0.23	-1.1
4,855,991	+		EFB2_04620	0.23	-3.4
4,855,992	-		EFB2_04620	0.23	-0.1
4,855,992	-		EFB2_04620	0.23	-3.2
4,855,992	-		EFB2_04620	0.23	-1.9
4,855,992	-		EFB2_04620	0.23	-1.1
4,855,992	-		EFB2_04620	0.23	+0.0
4,855,992	-		EFB2_04620	0.23	+1.1
4,855,992	-		EFB2_04620	0.23	+1.6
4,855,992	-		EFB2_04620	0.23	-2.9
4,856,052	+		EFB2_04620	0.53	+0.8
4,856,052	+		EFB2_04620	0.53	+0.1
4,856,091	+		EFB2_04620	0.73	+0.9
4,856,091	+		EFB2_04620	0.73	+0.7
4,856,091	+		EFB2_04620	0.73	-2.1
4,856,091	+		EFB2_04620	0.73	+1.7
4,856,091	+		EFB2_04620	0.73	-2.2
4,856,091	+		EFB2_04620	0.73	+0.9
4,856,091	+		EFB2_04620	0.73	+0.6
4,856,091	+		EFB2_04620	0.73	-0.3
4,856,091	+		EFB2_04620	0.73	-0.9
4,856,091	+		EFB2_04620	0.73	+0.9
4,856,091	+		EFB2_04620	0.73	+0.5
4,856,092	-		EFB2_04620	0.73	+0.1
4,856,092	-		EFB2_04620	0.73	-0.2
4,856,092	-		EFB2_04620	0.73	+1.3
4,856,092	-		EFB2_04620	0.73	-0.9
4,856,130	+				-0.3
4,856,143	+				+0.2
4,856,144	-				+0.1
4,856,144	-				-1.7
4,856,144	-				-0.4
4,856,151	+				-0.4
4,856,151	+				-0.5
4,856,151	+				-1.9
4,856,151	+				-1.4
4,856,152	-				+0.3
4,856,152	-				-0.3
4,856,155	+				-3.6
4,856,155	+				+0.4
4,856,155	+				-1.0
4,856,155	+				-3.6
4,856,155	+				-2.4
4,856,155	+				-2.9
4,856,155	+				-0.3
4,856,155	+				-0.8
4,856,155	+				+0.6
4,856,155	+				+0.6
4,856,155	+				-0.0
4,856,155	+				+0.4
4,856,156	-				+0.9
4,856,156	-				+1.4
4,856,156	-				-0.2
4,856,156	-				+1.2
4,856,156	-				-1.2
4,856,156	-				+0.7
4,856,156	-				-0.7
4,856,189	-				-1.9
4,856,305	+		EFB2_04621	0.20	+1.8
4,856,321	-		EFB2_04621	0.23	+0.3
4,856,350	+		EFB2_04621	0.26	-0.3
4,856,351	-		EFB2_04621	0.26	+1.3
4,856,505	+		EFB2_04621	0.46	+0.4
4,856,505	+		EFB2_04621	0.46	+0.2
4,856,505	+		EFB2_04621	0.46	-0.1
4,856,506	-		EFB2_04621	0.47	+0.8
4,856,506	-		EFB2_04621	0.47	-1.0
4,856,550	+		EFB2_04621	0.52	+0.2
4,856,558	-		EFB2_04621	0.53	+3.1
4,856,653	+		EFB2_04621	0.66	-0.1
4,856,653	+		EFB2_04621	0.66	+1.2
4,856,653	+		EFB2_04621	0.66	-1.9
4,856,654	-		EFB2_04621	0.66	-0.1
4,856,654	-		EFB2_04621	0.66	-0.8
4,856,654	-		EFB2_04621	0.66	-0.3
4,856,654	-		EFB2_04621	0.66	+1.2
4,856,654	-		EFB2_04621	0.66	-0.2
4,856,657	-		EFB2_04621	0.66	-2.5
4,856,970	+				-0.2
4,856,970	+				+1.7
4,856,996	+				+0.1
4,856,997	-				+2.1
4,856,997	-				+0.5
4,856,997	-				-0.2
4,856,997	-				-0.2
4,856,997	-				-2.1
4,857,008	+				+1.5
4,857,009	-				-3.1
4,857,050	+		EFB2_04622	0.12	+0.4
4,857,050	+		EFB2_04622	0.12	-0.3
4,857,050	+		EFB2_04622	0.12	-0.1
4,857,050	+		EFB2_04622	0.12	+0.9
4,857,051	-		EFB2_04622	0.12	-0.7
4,857,051	-		EFB2_04622	0.12	-0.9
4,857,051	-		EFB2_04622	0.12	-2.3
4,857,051	-		EFB2_04622	0.12	+0.5
4,857,051	-		EFB2_04622	0.12	-1.0
4,857,051	-		EFB2_04622	0.12	+0.1
4,857,071	-		EFB2_04622	0.14	-1.5
4,857,139	+		EFB2_04622	0.20	-0.8
4,857,139	+		EFB2_04622	0.20	-0.0
4,857,139	+		EFB2_04622	0.20	+1.3
4,857,139	+		EFB2_04622	0.20	-0.1
4,857,139	+		EFB2_04622	0.20	+1.0
4,857,139	+		EFB2_04622	0.20	-1.1
4,857,139	+		EFB2_04622	0.20	+1.0
4,857,139	+		EFB2_04622	0.20	-1.9
4,857,139	+		EFB2_04622	0.20	+0.5
4,857,139	+		EFB2_04622	0.20	+0.4
4,857,139	+		EFB2_04622	0.20	+0.2
4,857,139	+		EFB2_04622	0.20	+0.6
4,857,139	+		EFB2_04622	0.20	-0.2
4,857,139	+		EFB2_04622	0.20	-0.3
4,857,140	-		EFB2_04622	0.20	+1.0
4,857,140	-		EFB2_04622	0.20	+0.0
4,857,140	-		EFB2_04622	0.20	+0.9
4,857,140	-		EFB2_04622	0.20	-1.0
4,857,140	-		EFB2_04622	0.20	+0.0
4,857,140	-		EFB2_04622	0.20	-0.6
4,857,140	-		EFB2_04622	0.20	-1.8
4,857,140	-		EFB2_04622	0.20	+1.1
4,857,140	-		EFB2_04622	0.20	-0.3
4,857,140	-		EFB2_04622	0.20	-1.6
4,857,140	-		EFB2_04622	0.20	+0.7
4,857,140	-		EFB2_04622	0.20	-0.9
4,857,151	+		EFB2_04622	0.21	-1.2
4,857,151	+		EFB2_04622	0.21	-0.2
4,857,152	-		EFB2_04622	0.21	-0.5
4,857,152	-		EFB2_04622	0.21	+1.2
4,857,180	+		EFB2_04622	0.23	+0.3
4,857,180	+		EFB2_04622	0.23	+1.5
4,857,180	+		EFB2_04622	0.23	+1.3
4,857,180	+		EFB2_04622	0.23	-2.0
4,857,180	+		EFB2_04622	0.23	-0.1
4,857,180	+		EFB2_04622	0.23	-0.2
4,857,180	+		EFB2_04622	0.23	-0.4
4,857,181	-		EFB2_04622	0.24	-0.9
4,857,181	-		EFB2_04622	0.24	+1.7
4,857,181	-		EFB2_04622	0.24	+0.2
4,857,181	-		EFB2_04622	0.24	-0.2
4,857,181	-		EFB2_04622	0.24	+0.8
4,857,181	-		EFB2_04622	0.24	-2.4
4,857,181	-		EFB2_04622	0.24	-1.7
4,857,184	+		EFB2_04622	0.24	+1.3
4,857,184	+		EFB2_04622	0.24	-0.8
4,857,184	+		EFB2_04622	0.24	-2.9
4,857,184	+		EFB2_04622	0.24	+0.1
4,857,184	+		EFB2_04622	0.24	-0.0
4,857,185	-		EFB2_04622	0.24	-0.6
4,857,185	-		EFB2_04622	0.24	+0.4
4,857,185	-		EFB2_04622	0.24	-0.4
4,857,185	-		EFB2_04622	0.24	-0.5
4,857,185	-		EFB2_04622	0.24	+0.1
4,857,185	-		EFB2_04622	0.24	-1.1
4,857,185	-		EFB2_04622	0.24	-0.0
4,857,185	-		EFB2_04622	0.24	+0.1
4,857,185	-		EFB2_04622	0.24	-1.0
4,857,185	-		EFB2_04622	0.24	-0.8
4,857,262	-		EFB2_04622	0.31	+1.4
4,857,262	-		EFB2_04622	0.31	-0.2
4,857,262	-		EFB2_04622	0.31	-1.4
4,857,263	+		EFB2_04622	0.31	+0.6
4,857,263	+		EFB2_04622	0.31	+0.6
4,857,264	-		EFB2_04622	0.31	-2.2
4,857,264	-		EFB2_04622	0.31	-2.3
4,857,290	+		EFB2_04622	0.33	-0.0
4,857,290	+		EFB2_04622	0.33	-0.4
4,857,291	-		EFB2_04622	0.33	+1.4
4,857,291	-		EFB2_04622	0.33	+0.9
4,857,291	-		EFB2_04622	0.33	+0.5
4,857,291	-		EFB2_04622	0.33	+0.4
4,857,291	-		EFB2_04622	0.33	-0.7
4,857,291	-		EFB2_04622	0.33	+0.1
4,857,291	-		EFB2_04622	0.33	-0.4
4,857,291	-		EFB2_04622	0.33	-0.6
4,857,291	-		EFB2_04622	0.33	-1.5
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4,857,862	-		EFB2_04622	0.84	-0.6
4,857,898	+		EFB2_04622	0.87	+0.5
4,857,898	+		EFB2_04622	0.87	-1.5
4,857,899	-		EFB2_04622	0.87	-0.5
4,857,899	-		EFB2_04622	0.87	+0.4
4,857,899	-		EFB2_04622	0.87	+0.8