Strain Fitness in Escherichia fergusonii Becca around EFB2_01394

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
1,456,186	+				+0.3
1,456,188	+				+0.0
1,456,188	+				+1.2
1,456,188	+				+0.7
1,456,188	+				+0.2
1,456,189	-				-1.2
1,456,189	-				+2.0
1,456,189	-				-0.9
1,456,189	-				+0.8
1,456,189	-				+1.2
1,456,189	-				+0.9
1,456,189	-				+0.6
1,456,189	-				-0.6
1,456,189	-				+2.1
1,456,189	-				+0.7
1,456,198	+		EFB2_01392	0.11	+0.5
1,456,198	+		EFB2_01392	0.11	-0.9
1,456,199	-		EFB2_01392	0.12	+0.2
1,456,201	+		EFB2_01392	0.12	-0.2
1,456,201	+		EFB2_01392	0.12	+0.1
1,456,201	+		EFB2_01392	0.12	+0.7
1,456,222	+		EFB2_01392	0.16	+1.6
1,456,255	+		EFB2_01392	0.22	-0.1
1,456,255	+		EFB2_01392	0.22	+0.4
1,456,255	+		EFB2_01392	0.22	+0.9
1,456,255	+		EFB2_01392	0.22	+0.6
1,456,255	+		EFB2_01392	0.22	+1.8
1,456,255	+		EFB2_01392	0.22	+0.5
1,456,255	+		EFB2_01392	0.22	-0.9
1,456,255	+		EFB2_01392	0.22	+0.0
1,456,256	-		EFB2_01392	0.23	-0.5
1,456,256	-		EFB2_01392	0.23	+0.2
1,456,256	-		EFB2_01392	0.23	-0.8
1,456,256	-		EFB2_01392	0.23	-1.4
1,456,256	-		EFB2_01392	0.23	+0.4
1,456,256	-		EFB2_01392	0.23	-1.6
1,456,256	-		EFB2_01392	0.23	-2.8
1,456,256	-		EFB2_01392	0.23	-0.3
1,456,256	-		EFB2_01392	0.23	-1.7
1,456,256	-		EFB2_01392	0.23	-2.3
1,456,256	-		EFB2_01392	0.23	+1.1
1,456,256	-		EFB2_01392	0.23	-1.0
1,456,257	+		EFB2_01392	0.23	+0.3
1,456,257	+		EFB2_01392	0.23	-1.2
1,456,257	+		EFB2_01392	0.23	+1.0
1,456,257	+		EFB2_01392	0.23	-0.0
1,456,257	+		EFB2_01392	0.23	-0.1
1,456,257	+		EFB2_01392	0.23	-2.0
1,456,257	+		EFB2_01392	0.23	+0.1
1,456,257	+		EFB2_01392	0.23	+1.1
1,456,257	+		EFB2_01392	0.23	+0.1
1,456,257	+		EFB2_01392	0.23	-2.2
1,456,257	+		EFB2_01392	0.23	+0.6
1,456,257	+		EFB2_01392	0.23	+2.2
1,456,257	+		EFB2_01392	0.23	-0.3
1,456,257	+		EFB2_01392	0.23	-0.6
1,456,257	+		EFB2_01392	0.23	+0.8
1,456,257	+		EFB2_01392	0.23	-0.6
1,456,257	+		EFB2_01392	0.23	-0.6
1,456,257	+		EFB2_01392	0.23	+1.6
1,456,258	-		EFB2_01392	0.23	-1.8
1,456,258	-		EFB2_01392	0.23	-1.4
1,456,258	-		EFB2_01392	0.23	-0.9
1,456,258	-		EFB2_01392	0.23	-3.1
1,456,258	-		EFB2_01392	0.23	-0.9
1,456,258	-		EFB2_01392	0.23	-1.0
1,456,258	-		EFB2_01392	0.23	-0.1
1,456,258	-		EFB2_01392	0.23	-0.6
1,456,258	-		EFB2_01392	0.23	-1.1
1,456,258	-		EFB2_01392	0.23	-3.7
1,456,258	-		EFB2_01392	0.23	+0.6
1,456,258	-		EFB2_01392	0.23	+1.4
1,456,258	-		EFB2_01392	0.23	+0.9
1,456,258	-		EFB2_01392	0.23	+1.9
1,456,258	-		EFB2_01392	0.23	-1.2
1,456,258	-		EFB2_01392	0.23	+1.9
1,456,258	-		EFB2_01392	0.23	+0.6
1,456,258	-		EFB2_01392	0.23	+0.3
1,456,258	-		EFB2_01392	0.23	-0.8
1,456,258	-		EFB2_01392	0.23	-0.7
1,456,258	-		EFB2_01392	0.23	+0.2
1,456,258	-		EFB2_01392	0.23	-1.7
1,456,258	-		EFB2_01392	0.23	-0.5
1,456,258	-		EFB2_01392	0.23	-2.9
1,456,258	-		EFB2_01392	0.23	+1.3
1,456,276	+		EFB2_01392	0.27	-0.9
1,456,276	+		EFB2_01392	0.27	-0.2
1,456,276	+		EFB2_01392	0.27	+0.3
1,456,276	+		EFB2_01392	0.27	+0.6
1,456,276	+		EFB2_01392	0.27	-0.5
1,456,276	+		EFB2_01392	0.27	-1.1
1,456,276	+		EFB2_01392	0.27	-1.4
1,456,276	+		EFB2_01392	0.27	+0.9
1,456,276	+		EFB2_01392	0.27	+1.2
1,456,276	+		EFB2_01392	0.27	+0.7
1,456,276	+		EFB2_01392	0.27	+1.2
1,456,276	+		EFB2_01392	0.27	+3.1
1,456,276	+		EFB2_01392	0.27	+0.1
1,456,276	+		EFB2_01392	0.27	-0.5
1,456,276	+		EFB2_01392	0.27	-0.0
1,456,276	+		EFB2_01392	0.27	-0.0
1,456,276	+		EFB2_01392	0.27	+0.1
1,456,276	+		EFB2_01392	0.27	-1.2
1,456,276	+		EFB2_01392	0.27	-2.0
1,456,276	+		EFB2_01392	0.27	+0.4
1,456,276	+		EFB2_01392	0.27	-0.9
1,456,276	+		EFB2_01392	0.27	-0.6
1,456,276	+		EFB2_01392	0.27	-0.3
1,456,277	-		EFB2_01392	0.27	+0.2
1,456,277	-		EFB2_01392	0.27	-0.6
1,456,277	-		EFB2_01392	0.27	+0.1
1,456,277	-		EFB2_01392	0.27	+0.6
1,456,277	-		EFB2_01392	0.27	+1.1
1,456,277	-		EFB2_01392	0.27	-0.4
1,456,277	-		EFB2_01392	0.27	+1.4
1,456,277	-		EFB2_01392	0.27	+0.2
1,456,277	-		EFB2_01392	0.27	+0.3
1,456,277	-		EFB2_01392	0.27	+0.1
1,456,277	-		EFB2_01392	0.27	+0.4
1,456,277	-		EFB2_01392	0.27	-1.0
1,456,277	-		EFB2_01392	0.27	-0.2
1,456,277	-		EFB2_01392	0.27	-1.4
1,456,277	-		EFB2_01392	0.27	+0.4
1,456,277	-		EFB2_01392	0.27	+1.4
1,456,277	-		EFB2_01392	0.27	+0.0
1,456,277	-		EFB2_01392	0.27	-0.4
1,456,277	-		EFB2_01392	0.27	-0.4
1,456,277	-		EFB2_01392	0.27	+0.1
1,456,277	-		EFB2_01392	0.27	-0.2
1,456,277	-		EFB2_01392	0.27	+0.1
1,456,277	-		EFB2_01392	0.27	-0.9
1,456,277	-		EFB2_01392	0.27	+0.9
1,456,277	-		EFB2_01392	0.27	+0.1
1,456,277	-		EFB2_01392	0.27	+1.2
1,456,277	-		EFB2_01392	0.27	+0.5
1,456,277	-		EFB2_01392	0.27	+0.0
1,456,277	-		EFB2_01392	0.27	-0.1
1,456,277	-		EFB2_01392	0.27	+0.6
1,456,277	-		EFB2_01392	0.27	-1.1
1,456,277	-		EFB2_01392	0.27	-0.8
1,456,277	-		EFB2_01392	0.27	-0.9
1,456,277	-		EFB2_01392	0.27	+0.4
1,456,277	-		EFB2_01392	0.27	+2.2
1,456,278	+		EFB2_01392	0.27	-2.4
1,456,278	+		EFB2_01392	0.27	+0.8
1,456,278	+		EFB2_01392	0.27	-2.3
1,456,278	+		EFB2_01392	0.27	+1.2
1,456,278	+		EFB2_01392	0.27	+0.7
1,456,278	+		EFB2_01392	0.27	-1.9
1,456,278	+		EFB2_01392	0.27	-0.1
1,456,278	+		EFB2_01392	0.27	-2.2
1,456,278	+		EFB2_01392	0.27	+0.6
1,456,278	+		EFB2_01392	0.27	-1.1
1,456,278	+		EFB2_01392	0.27	+2.2
1,456,278	+		EFB2_01392	0.27	-1.9
1,456,278	+		EFB2_01392	0.27	-0.4
1,456,278	+		EFB2_01392	0.27	+0.1
1,456,278	+		EFB2_01392	0.27	+0.1
1,456,278	+		EFB2_01392	0.27	+0.6
1,456,278	+		EFB2_01392	0.27	-0.1
1,456,278	+		EFB2_01392	0.27	+1.6
1,456,278	+		EFB2_01392	0.27	-0.2
1,456,278	+		EFB2_01392	0.27	+1.7
1,456,278	+		EFB2_01392	0.27	+0.2
1,456,278	+		EFB2_01392	0.27	+0.7
1,456,278	+		EFB2_01392	0.27	-0.2
1,456,278	+		EFB2_01392	0.27	+0.1
1,456,278	+		EFB2_01392	0.27	-0.7
1,456,278	+		EFB2_01392	0.27	-0.8
1,456,278	+		EFB2_01392	0.27	-2.2
1,456,278	+		EFB2_01392	0.27	-1.8
1,456,278	+		EFB2_01392	0.27	+0.6
1,456,278	+		EFB2_01392	0.27	+0.2
1,456,278	+		EFB2_01392	0.27	-0.9
1,456,278	+		EFB2_01392	0.27	-2.2
1,456,278	+		EFB2_01392	0.27	-1.4
1,456,278	+		EFB2_01392	0.27	-1.9
1,456,278	+		EFB2_01392	0.27	-2.7
1,456,279	-		EFB2_01392	0.27	-1.2
1,456,279	-		EFB2_01392	0.27	-1.4
1,456,279	-		EFB2_01392	0.27	+1.3
1,456,279	-		EFB2_01392	0.27	+0.2
1,456,279	-		EFB2_01392	0.27	-0.4
1,456,279	-		EFB2_01392	0.27	+0.8
1,456,279	-		EFB2_01392	0.27	+1.2
1,456,279	-		EFB2_01392	0.27	+0.3
1,456,279	-		EFB2_01392	0.27	+0.6
1,456,279	-		EFB2_01392	0.27	+1.0
1,456,279	-		EFB2_01392	0.27	-0.7
1,456,279	-		EFB2_01392	0.27	-2.5
1,456,279	-		EFB2_01392	0.27	+0.4
1,456,279	-		EFB2_01392	0.27	+0.5
1,456,279	-		EFB2_01392	0.27	-3.3
1,456,279	-		EFB2_01392	0.27	-0.2
1,456,279	-		EFB2_01392	0.27	+1.7
1,456,279	-		EFB2_01392	0.27	-1.5
1,456,279	-		EFB2_01392	0.27	+1.4
1,456,279	-		EFB2_01392	0.27	+1.2
1,456,279	-		EFB2_01392	0.27	-1.4
1,456,279	-		EFB2_01392	0.27	+0.4
1,456,279	-		EFB2_01392	0.27	-0.5
1,456,279	-		EFB2_01392	0.27	-1.4
1,456,279	-		EFB2_01392	0.27	+0.6
1,456,279	-		EFB2_01392	0.27	+0.4
1,456,284	-		EFB2_01392	0.28	-2.2
1,456,301	+		EFB2_01392	0.31	-1.9
1,456,301	+		EFB2_01392	0.31	+1.2
1,456,302	-		EFB2_01392	0.32	-2.4
1,456,309	+		EFB2_01392	0.33	+0.9
1,456,309	+		EFB2_01392	0.33	-0.9
1,456,309	+		EFB2_01392	0.33	-3.4
1,456,310	-		EFB2_01392	0.33	-0.6
1,456,310	-		EFB2_01392	0.33	-0.2
1,456,310	-		EFB2_01392	0.33	-0.3
1,456,310	-		EFB2_01392	0.33	-0.5
1,456,321	+		EFB2_01392	0.35	-0.5
1,456,321	+		EFB2_01392	0.35	+0.8
1,456,321	+		EFB2_01392	0.35	+1.5
1,456,321	+		EFB2_01392	0.35	+0.0
1,456,321	+		EFB2_01392	0.35	-3.4
1,456,321	+		EFB2_01392	0.35	+0.8
1,456,322	-		EFB2_01392	0.35	-0.2
1,456,322	-		EFB2_01392	0.35	-1.7
1,456,322	-		EFB2_01392	0.35	-0.9
1,456,322	-		EFB2_01392	0.35	+0.3
1,456,322	-		EFB2_01392	0.35	-0.5
1,456,322	-		EFB2_01392	0.35	+1.1
1,456,322	-		EFB2_01392	0.35	-1.0
1,456,322	-		EFB2_01392	0.35	-1.1
1,456,322	-		EFB2_01392	0.35	-0.0
1,456,433	-		EFB2_01392	0.57	-3.0
1,456,478	+		EFB2_01392	0.66	+0.2
1,456,479	-		EFB2_01392	0.66	+3.2
1,456,507	+		EFB2_01392	0.71	-1.5
1,456,508	-		EFB2_01392	0.72	+0.3
1,456,508	-		EFB2_01392	0.72	+0.5
1,456,508	-		EFB2_01392	0.72	-0.4
1,456,510	+		EFB2_01392	0.72	-2.4
1,456,510	+		EFB2_01392	0.72	+1.6
1,456,523	-		EFB2_01392	0.74	-1.8
1,456,538	-		EFB2_01392	0.77	+1.9
1,456,538	-		EFB2_01392	0.77	+0.4
1,456,658	+				-1.5
1,456,659	-				-1.9
1,456,668	+				+2.2
1,456,669	-				-0.1
1,456,670	+				+0.2
1,456,671	-				-2.1
1,456,695	+				-1.7
1,456,718	-				+1.2
1,456,741	-				+1.6
1,456,785	+				+0.7
1,456,800	+				-2.9
1,456,800	+				-0.2
1,456,800	+				+0.9
1,456,801	-				+1.6
1,456,801	-				-0.8
1,456,801	-				-1.6
1,456,804	+				-0.7
1,456,804	+				-1.6
1,456,805	-				-1.0
1,456,805	-				-1.8
1,456,815	+				-2.5
1,456,816	-				-0.8
1,456,820	-				-0.2
1,456,938	+				-1.6
1,456,939	-				-1.1
1,456,939	-				+0.0
1,456,977	+				+2.2
1,457,057	-		EFB2_01393	0.51	+0.2
1,457,057	-		EFB2_01393	0.51	+1.7
1,457,057	-		EFB2_01393	0.51	-0.5
1,457,060	+		EFB2_01393	0.53	-1.3
1,457,060	+		EFB2_01393	0.53	-0.5
1,457,061	-		EFB2_01393	0.53	-1.1
1,457,061	-		EFB2_01393	0.53	-1.6
1,457,061	-		EFB2_01393	0.53	+1.3
1,457,061	-		EFB2_01393	0.53	+0.1
1,457,081	+		EFB2_01393	0.65	-0.5
1,457,082	-		EFB2_01393	0.66	-0.5
1,457,082	-		EFB2_01393	0.66	-1.5
1,457,082	-		EFB2_01393	0.66	+1.3
1,457,082	-		EFB2_01393	0.66	-0.8
1,457,082	-		EFB2_01393	0.66	-1.1
1,457,082	-		EFB2_01393	0.66	-0.1
1,457,082	-		EFB2_01393	0.66	-0.1
1,457,098	-		EFB2_01393	0.75	-0.4
1,457,105	-		EFB2_01393	0.79	-1.7
1,457,120	+		EFB2_01393	0.87	-2.4
1,457,142	-				+1.6
1,457,176	+				+2.0
1,457,176	+				+1.9
1,457,176	+				-0.3
1,457,176	+				+2.2
1,457,176	+				+1.5
1,457,176	+				-1.7
1,457,176	+				-0.8
1,457,177	-				-0.2
1,457,177	-				-1.2
1,457,177	-				-0.9
1,457,177	-				-0.9
1,457,177	-				-0.9
1,457,177	-				+0.3
1,457,197	+		EFB2_01394	0.13	+1.1
1,457,201	+		EFB2_01394	0.16	-3.0
1,457,201	+		EFB2_01394	0.16	-1.8
1,457,201	+		EFB2_01394	0.16	+1.2
1,457,201	+		EFB2_01394	0.16	+0.3
1,457,201	+		EFB2_01394	0.16	-2.4
1,457,201	+		EFB2_01394	0.16	+0.3
1,457,202	-		EFB2_01394	0.16	+1.2
1,457,202	-		EFB2_01394	0.16	+1.6
1,457,202	-		EFB2_01394	0.16	+1.1
1,457,202	-		EFB2_01394	0.16	+0.3
1,457,202	-		EFB2_01394	0.16	+0.3
1,457,202	-		EFB2_01394	0.16	-0.2
1,457,202	-		EFB2_01394	0.16	-2.0
1,457,202	-		EFB2_01394	0.16	-0.7
1,457,202	-		EFB2_01394	0.16	+0.2
1,457,202	-		EFB2_01394	0.16	+0.6
1,457,202	-		EFB2_01394	0.16	+0.5
1,457,202	-		EFB2_01394	0.16	+0.4
1,457,202	-		EFB2_01394	0.16	+0.6
1,457,241	+		EFB2_01394	0.42	+1.6
1,457,263	+		EFB2_01394	0.56	-0.4
1,457,267	+		EFB2_01394	0.59	+0.3
1,457,267	+		EFB2_01394	0.59	-2.9
1,457,267	+		EFB2_01394	0.59	+0.8
1,457,267	+		EFB2_01394	0.59	+0.9
1,457,267	+		EFB2_01394	0.59	-0.1
1,457,268	-		EFB2_01394	0.59	+0.8
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