Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00886

Experiment: Inulin from chicory 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Inulin from chicory 2.5 mg/mL (C)
9,022	-		BACOVA_00885	0.69	-0.7
9,034	-		BACOVA_00885	0.69	-1.2
9,068	-		BACOVA_00885	0.71	-0.0
9,134	+		BACOVA_00885	0.72	+1.1
9,134	+		BACOVA_00885	0.72	-1.2
9,135	-		BACOVA_00885	0.73	+0.7
9,135	-		BACOVA_00885	0.73	+2.0
9,137	-		BACOVA_00885	0.73	-1.1
9,193	+		BACOVA_00885	0.74	+0.3
9,194	-		BACOVA_00885	0.74	-0.3
9,198	-		BACOVA_00885	0.74	+1.5
9,206	-		BACOVA_00885	0.75	+0.8
9,208	+		BACOVA_00885	0.75	-0.1
9,209	-		BACOVA_00885	0.75	-0.6
9,241	-		BACOVA_00885	0.76	-0.1
9,256	+		BACOVA_00885	0.76	-0.6
9,261	-		BACOVA_00885	0.76	+1.8
9,310	+		BACOVA_00885	0.78	+1.3
9,351	-		BACOVA_00885	0.79	-0.4
9,351	-		BACOVA_00885	0.79	-0.9
9,375	-		BACOVA_00885	0.80	+1.8
9,376	+		BACOVA_00885	0.80	+0.1
9,487	-		BACOVA_00885	0.83	+0.0
9,509	-		BACOVA_00885	0.84	+0.0
9,547	+		BACOVA_00885	0.85	+0.8
9,549	+		BACOVA_00885	0.85	-0.2
9,582	+		BACOVA_00885	0.86	-0.5
9,583	-		BACOVA_00885	0.86	-0.3
9,593	-		BACOVA_00885	0.86	+0.3
9,607	+		BACOVA_00885	0.87	+1.5
9,689	+		BACOVA_00885	0.89	+0.5
9,690	-		BACOVA_00885	0.89	+0.3
9,690	-		BACOVA_00885	0.89	-1.0
9,729	+				+0.0
9,730	-				-1.1
9,750	+				-0.4
9,790	-				+0.5
9,790	-				+0.4
9,800	-				-0.5
9,806	-				+0.4
9,808	+				+0.4
9,808	+				+2.8
9,827	-				-0.2
9,986	-				-1.2
10,091	+				+1.0
10,091	+				-0.3
10,109	+				+0.4
10,110	-				+0.7
10,209	+		BACOVA_00886	0.12	+0.4
10,224	+		BACOVA_00886	0.13	-0.2
10,224	+		BACOVA_00886	0.13	+0.3
10,226	+		BACOVA_00886	0.13	-0.0
10,283	+		BACOVA_00886	0.17	-0.9
10,283	+		BACOVA_00886	0.17	+1.6
10,284	-		BACOVA_00886	0.17	-0.9
10,284	-		BACOVA_00886	0.17	+0.1
10,284	-		BACOVA_00886	0.17	+0.1
10,284	-		BACOVA_00886	0.17	+0.1
10,284	-		BACOVA_00886	0.17	+0.4
10,302	-		BACOVA_00886	0.18	-0.2
10,302	-		BACOVA_00886	0.18	-0.0
10,303	+		BACOVA_00886	0.18	+1.1
10,339	-		BACOVA_00886	0.20	-0.3
10,344	+		BACOVA_00886	0.21	+0.1
10,345	-		BACOVA_00886	0.21	+1.2
10,371	+		BACOVA_00886	0.22	+0.0
10,372	-		BACOVA_00886	0.22	-2.4
10,404	+		BACOVA_00886	0.24	+0.1
10,405	-		BACOVA_00886	0.24	+0.1
10,425	+		BACOVA_00886	0.26	+0.6
10,426	-		BACOVA_00886	0.26	-0.3
10,430	+		BACOVA_00886	0.26	+0.5
10,430	+		BACOVA_00886	0.26	+0.0
10,431	-		BACOVA_00886	0.26	-0.2
10,440	+		BACOVA_00886	0.27	-0.4
10,441	-		BACOVA_00886	0.27	-1.3
10,441	-		BACOVA_00886	0.27	-0.7
10,444	-		BACOVA_00886	0.27	+0.1
10,474	-		BACOVA_00886	0.29	+1.3
10,474	-		BACOVA_00886	0.29	-0.6
10,486	+		BACOVA_00886	0.30	+1.4
10,494	+		BACOVA_00886	0.30	-0.4
10,527	+		BACOVA_00886	0.32	+0.4
10,543	+		BACOVA_00886	0.33	+1.2
10,544	-		BACOVA_00886	0.33	-0.4
10,566	+		BACOVA_00886	0.35	-0.4
10,566	+		BACOVA_00886	0.35	+0.4
10,566	+		BACOVA_00886	0.35	+0.1
10,567	-		BACOVA_00886	0.35	+0.6
10,567	-		BACOVA_00886	0.35	-0.7
10,568	+		BACOVA_00886	0.35	+0.4
10,569	-		BACOVA_00886	0.35	+0.4
10,569	-		BACOVA_00886	0.35	+0.3
10,569	-		BACOVA_00886	0.35	-0.6
10,570	+		BACOVA_00886	0.35	+0.2
10,571	-		BACOVA_00886	0.35	-0.7
10,571	-		BACOVA_00886	0.35	-0.3
10,602	+		BACOVA_00886	0.37	+0.8
10,618	+		BACOVA_00886	0.38	-0.7
10,618	+		BACOVA_00886	0.38	-0.1
10,619	-		BACOVA_00886	0.38	-0.3
10,639	+		BACOVA_00886	0.39	-0.4
10,728	+		BACOVA_00886	0.45	+0.6
10,729	-		BACOVA_00886	0.45	+0.8
10,765	-		BACOVA_00886	0.47	+0.1
10,765	-		BACOVA_00886	0.47	+0.0
10,799	-		BACOVA_00886	0.49	+0.6
10,815	+		BACOVA_00886	0.50	+1.0
10,816	-		BACOVA_00886	0.50	+0.2
10,908	+		BACOVA_00886	0.56	-0.7
10,909	-		BACOVA_00886	0.56	-0.6
10,909	-		BACOVA_00886	0.56	+0.3
10,930	+		BACOVA_00886	0.58	-0.9
10,931	-		BACOVA_00886	0.58	-0.9
10,940	+		BACOVA_00886	0.58	+0.8
10,948	-		BACOVA_00886	0.59	-0.1
10,951	+		BACOVA_00886	0.59	-0.6
10,951	+		BACOVA_00886	0.59	+1.2
10,953	+		BACOVA_00886	0.59	+0.4
10,954	-		BACOVA_00886	0.59	-0.3
10,963	-		BACOVA_00886	0.60	-1.9
10,968	+		BACOVA_00886	0.60	+1.3
10,969	-		BACOVA_00886	0.60	-0.2
10,969	-		BACOVA_00886	0.60	+0.3
10,985	+		BACOVA_00886	0.61	-0.1
10,985	+		BACOVA_00886	0.61	+0.4
10,985	+		BACOVA_00886	0.61	-1.2
10,986	-		BACOVA_00886	0.61	-0.2
11,005	-		BACOVA_00886	0.62	+0.6
11,006	+		BACOVA_00886	0.63	-0.1
11,006	+		BACOVA_00886	0.63	-0.2
11,006	+		BACOVA_00886	0.63	-0.4
11,007	-		BACOVA_00886	0.63	+0.2
11,015	+		BACOVA_00886	0.63	+2.2
11,017	+		BACOVA_00886	0.63	-0.1
11,067	+		BACOVA_00886	0.66	-1.1
11,074	-		BACOVA_00886	0.67	-1.8
11,149	-		BACOVA_00886	0.72	+0.7
11,163	+		BACOVA_00886	0.73	+1.9
11,164	-		BACOVA_00886	0.73	-0.9
11,175	-		BACOVA_00886	0.73	+0.5
11,185	-		BACOVA_00886	0.74	+0.2
11,257	-		BACOVA_00886	0.78	+0.4
11,269	-		BACOVA_00886	0.79	+0.7
11,275	-		BACOVA_00886	0.80	+0.4
11,289	-		BACOVA_00886	0.81	+1.0
11,293	+		BACOVA_00886	0.81	-0.2
11,293	+		BACOVA_00886	0.81	-0.1
11,294	-		BACOVA_00886	0.81	-0.6
11,294	-		BACOVA_00886	0.81	+0.0
11,294	-		BACOVA_00886	0.81	-0.2
11,294	-		BACOVA_00886	0.81	-1.2
11,294	-		BACOVA_00886	0.81	+0.1
11,294	-		BACOVA_00886	0.81	-0.1
11,294	-		BACOVA_00886	0.81	+0.9
11,298	-		BACOVA_00886	0.81	+0.4
11,311	-		BACOVA_00886	0.82	+0.7
11,314	+		BACOVA_00886	0.82	-0.0
11,314	+		BACOVA_00886	0.82	+2.0
11,315	-		BACOVA_00886	0.82	+0.5
11,320	-		BACOVA_00886	0.82	+0.1
11,320	-		BACOVA_00886	0.82	-1.0
11,325	+		BACOVA_00886	0.83	+1.6
11,345	-		BACOVA_00886	0.84	+0.3
11,373	+		BACOVA_00886	0.86	-1.3
11,373	+		BACOVA_00886	0.86	+0.6
11,374	-		BACOVA_00886	0.86	-0.4
11,374	-		BACOVA_00886	0.86	-0.2
11,374	-		BACOVA_00886	0.86	+0.4
11,377	-		BACOVA_00886	0.86	+1.2
11,377	-		BACOVA_00886	0.86	+0.1
11,481	-				-0.4
11,481	-				+0.7
11,483	-				-1.5
11,590	-				+1.5
11,594	-				-0.0
11,615	-				+1.4
11,635	+				-0.5
11,638	-				+0.6
11,639	+				+0.1
11,639	+				+0.8
11,670	+				+1.2
11,694	-		BACOVA_00887	0.10	-0.7
11,703	+		BACOVA_00887	0.12	+0.8
11,704	-		BACOVA_00887	0.12	-0.9
11,719	+		BACOVA_00887	0.14	-0.5
11,720	-		BACOVA_00887	0.14	-0.4
11,721	+		BACOVA_00887	0.14	+1.2
11,762	+		BACOVA_00887	0.19	+0.6
11,801	+		BACOVA_00887	0.25	+0.4
11,802	-		BACOVA_00887	0.25	-1.4
11,805	-		BACOVA_00887	0.25	-1.1
11,831	+		BACOVA_00887	0.29	-0.7
11,840	+		BACOVA_00887	0.30	+1.1
11,865	-		BACOVA_00887	0.33	-0.3
11,900	-		BACOVA_00887	0.38	-0.5
11,900	-		BACOVA_00887	0.38	+1.6
11,921	+		BACOVA_00887	0.41	-0.1
11,921	+		BACOVA_00887	0.41	+1.2
11,922	-		BACOVA_00887	0.41	-1.1
11,972	-		BACOVA_00887	0.48	-0.1
12,066	+		BACOVA_00887	0.60	-0.7
12,067	-		BACOVA_00887	0.60	+0.1
12,075	-		BACOVA_00887	0.61	+0.0
12,078	+		BACOVA_00887	0.62	-0.5
12,078	+		BACOVA_00887	0.62	+0.7
12,079	-		BACOVA_00887	0.62	-0.2
12,137	-		BACOVA_00887	0.70	-2.3
12,137	-		BACOVA_00887	0.70	+0.4
12,169	+		BACOVA_00887	0.74	+0.3
12,173	-		BACOVA_00887	0.74	-1.0
12,224	+		BACOVA_00887	0.81	+0.2
12,240	+		BACOVA_00887	0.83	+0.8
12,246	+		BACOVA_00887	0.84	+0.2
12,256	-		BACOVA_00887	0.86	-0.6
12,279	+		BACOVA_00887	0.89	+0.5
12,292	+				+0.2
12,293	-				-1.4
12,337	-				-0.7
12,382	-				+1.0
12,382	-				+0.2
12,400	+				-1.0
12,401	-				-0.7
12,407	+				+0.1
12,414	-				-0.7
12,419	+				+0.2
12,450	+				+0.3
12,460	+				-0.7
12,461	-				-1.3
12,461	-				-0.0
12,468	+				+0.6
12,468	+				-1.6
12,496	-				+0.3
12,499	-				+0.3
12,504	+				+0.3
12,531	-				-1.8
12,531	-				-0.9
12,542	+				-1.1
12,546	+				-0.5
12,546	+				-0.6
12,555	+		BACOVA_00888	0.10	-0.5
12,555	+		BACOVA_00888	0.10	+0.7
12,555	+		BACOVA_00888	0.10	+0.3
12,556	-		BACOVA_00888	0.10	-0.8