Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02973

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02970 and MPMX26_02971 are separated by 11 nucleotidesMPMX26_02971 and MPMX26_02972 are separated by 3 nucleotidesMPMX26_02972 and MPMX26_02973 are separated by 12 nucleotidesMPMX26_02973 and MPMX26_02974 overlap by 8 nucleotidesMPMX26_02974 and MPMX26_02975 are separated by 21 nucleotides MPMX26_02970: MPMX26_02970 - Riboflavin biosynthesis protein RibBA, at 3,086,244 to 3,087,365 _02970 MPMX26_02971: MPMX26_02971 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,087,377 to 3,087,847 _02971 MPMX26_02972: MPMX26_02972 - Transcription antitermination protein NusB, at 3,087,851 to 3,088,300 _02972 MPMX26_02973: MPMX26_02973 - Thiamine-monophosphate kinase, at 3,088,313 to 3,089,230 _02973 MPMX26_02974: MPMX26_02974 - Phosphatidylglycerophosphatase A, at 3,089,223 to 3,089,729 _02974 MPMX26_02975: MPMX26_02975 - Bifunctional protein GlmU, at 3,089,751 to 3,091,115 _02975 Position (kb) 3088 3089 3090Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3087.329 kb on + strandat 3088.295 kb on + strandat 3088.303 kb on + strandat 3089.250 kb on + strandat 3089.255 kb on + strandat 3089.255 kb on + strandat 3089.255 kb on + strandat 3089.262 kb on + strandat 3089.267 kb on + strandat 3089.267 kb on + strandat 3089.267 kb on + strandat 3089.354 kb on + strand, within MPMX26_02974at 3089.354 kb on + strand, within MPMX26_02974at 3089.354 kb on + strand, within MPMX26_02974at 3089.354 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.394 kb on + strand, within MPMX26_02974at 3089.402 kb on - strand, within MPMX26_02974at 3089.406 kb on + strand, within MPMX26_02974at 3089.406 kb on + strand, within MPMX26_02974at 3089.406 kb on + strand, within MPMX26_02974at 3089.448 kb on + strand, within MPMX26_02974at 3089.453 kb on + strand, within MPMX26_02974at 3089.463 kb on + strand, within MPMX26_02974at 3089.507 kb on + strand, within MPMX26_02974at 3089.507 kb on + strand, within MPMX26_02974at 3089.574 kb on + strand, within MPMX26_02974at 3089.603 kb on + strand, within MPMX26_02974at 3089.622 kb on + strand, within MPMX26_02974at 3089.678 kb on + strand, within MPMX26_02974at 3089.678 kb on + strand, within MPMX26_02974

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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3,087,329 + -1.0
3,088,295 + -2.0
3,088,303 + +0.4
3,089,250 + +2.5
3,089,255 + +3.4
3,089,255 + +2.7
3,089,255 + +2.4
3,089,262 + +3.9
3,089,267 + +4.1
3,089,267 + +3.2
3,089,267 + +3.7
3,089,354 + MPMX26_02974 0.26 +3.7
3,089,354 + MPMX26_02974 0.26 +3.0
3,089,354 + MPMX26_02974 0.26 +3.9
3,089,354 + MPMX26_02974 0.26 +3.4
3,089,394 + MPMX26_02974 0.34 +3.4
3,089,394 + MPMX26_02974 0.34 +4.9
3,089,394 + MPMX26_02974 0.34 +1.5
3,089,394 + MPMX26_02974 0.34 +2.8
3,089,394 + MPMX26_02974 0.34 +3.6
3,089,394 + MPMX26_02974 0.34 +3.1
3,089,402 - MPMX26_02974 0.35 +4.1
3,089,406 + MPMX26_02974 0.36 +2.9
3,089,406 + MPMX26_02974 0.36 +3.2
3,089,406 + MPMX26_02974 0.36 +2.1
3,089,448 + MPMX26_02974 0.44 +2.7
3,089,453 + MPMX26_02974 0.45 +3.0
3,089,463 + MPMX26_02974 0.47 +2.6
3,089,507 + MPMX26_02974 0.56 +3.2
3,089,507 + MPMX26_02974 0.56 +1.4
3,089,574 + MPMX26_02974 0.69 +4.8
3,089,603 + MPMX26_02974 0.75 +1.8
3,089,622 + MPMX26_02974 0.79 +2.1
3,089,678 + MPMX26_02974 0.90 +2.7
3,089,678 + MPMX26_02974 0.90 +3.4

Or see this region's nucleotide sequence