Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02872 and MPMX26_02873 are separated by 195 nucleotides MPMX26_02873 and MPMX26_02874 are separated by 175 nucleotides
MPMX26_02872: MPMX26_02872 - hypothetical protein, at 2,969,020 to 2,969,904
_02872
MPMX26_02873: MPMX26_02873 - hypothetical protein, at 2,970,100 to 2,971,158
_02873
MPMX26_02874: MPMX26_02874 - hypothetical protein, at 2,971,334 to 2,972,365
_02874
Position (kb)
2970
2971
2972 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2969.199 kb on - strand, within MPMX26_02872 at 2969.199 kb on - strand, within MPMX26_02872 at 2969.199 kb on - strand, within MPMX26_02872 at 2969.280 kb on - strand, within MPMX26_02872 at 2969.327 kb on + strand, within MPMX26_02872 at 2969.396 kb on - strand, within MPMX26_02872 at 2969.409 kb on - strand, within MPMX26_02872 at 2969.439 kb on - strand, within MPMX26_02872 at 2969.647 kb on + strand, within MPMX26_02872 at 2969.655 kb on - strand, within MPMX26_02872 at 2969.690 kb on + strand, within MPMX26_02872 at 2969.745 kb on - strand, within MPMX26_02872 at 2969.765 kb on - strand, within MPMX26_02872 at 2969.949 kb on + strand at 2969.949 kb on + strand at 2969.962 kb on - strand at 2970.005 kb on + strand at 2970.013 kb on - strand at 2970.013 kb on - strand at 2970.013 kb on - strand at 2970.092 kb on - strand at 2970.105 kb on - strand at 2970.170 kb on - strand at 2970.170 kb on - strand at 2970.243 kb on - strand, within MPMX26_02873 at 2970.305 kb on - strand, within MPMX26_02873 at 2970.394 kb on + strand, within MPMX26_02873 at 2970.431 kb on + strand, within MPMX26_02873 at 2970.589 kb on - strand, within MPMX26_02873 at 2970.992 kb on - strand, within MPMX26_02873 at 2971.089 kb on + strand at 2971.121 kb on + strand at 2971.231 kb on - strand at 2971.272 kb on - strand at 2971.277 kb on - strand at 2971.386 kb on - strand at 2971.402 kb on - strand at 2971.425 kb on - strand at 2971.425 kb on - strand at 2971.477 kb on - strand, within MPMX26_02874 at 2971.477 kb on - strand, within MPMX26_02874 at 2971.483 kb on - strand, within MPMX26_02874 at 2971.483 kb on - strand, within MPMX26_02874 at 2971.483 kb on - strand, within MPMX26_02874 at 2971.658 kb on - strand, within MPMX26_02874 at 2971.688 kb on - strand, within MPMX26_02874 at 2971.709 kb on - strand, within MPMX26_02874 at 2971.709 kb on - strand, within MPMX26_02874 at 2971.709 kb on - strand, within MPMX26_02874 at 2971.709 kb on - strand, within MPMX26_02874 at 2971.813 kb on - strand, within MPMX26_02874 at 2971.838 kb on - strand, within MPMX26_02874 at 2971.846 kb on - strand, within MPMX26_02874 at 2971.887 kb on + strand, within MPMX26_02874 at 2971.887 kb on - strand, within MPMX26_02874 at 2971.939 kb on - strand, within MPMX26_02874 at 2971.987 kb on - strand, within MPMX26_02874 at 2972.137 kb on - strand, within MPMX26_02874
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,969,199 - MPMX26_02872 0.20 -0.4 2,969,199 - MPMX26_02872 0.20 +0.8 2,969,199 - MPMX26_02872 0.20 -0.7 2,969,280 - MPMX26_02872 0.29 +0.7 2,969,327 + MPMX26_02872 0.35 +0.8 2,969,396 - MPMX26_02872 0.42 +0.4 2,969,409 - MPMX26_02872 0.44 -0.8 2,969,439 - MPMX26_02872 0.47 +0.4 2,969,647 + MPMX26_02872 0.71 +0.9 2,969,655 - MPMX26_02872 0.72 +1.2 2,969,690 + MPMX26_02872 0.76 +0.2 2,969,745 - MPMX26_02872 0.82 +1.1 2,969,765 - MPMX26_02872 0.84 -0.5 2,969,949 + -0.9 2,969,949 + +0.2 2,969,962 - -1.0 2,970,005 + +0.2 2,970,013 - +0.1 2,970,013 - -0.0 2,970,013 - -1.1 2,970,092 - -0.0 2,970,105 - +1.8 2,970,170 - +0.8 2,970,170 - -0.7 2,970,243 - MPMX26_02873 0.14 -1.4 2,970,305 - MPMX26_02873 0.19 -0.3 2,970,394 + MPMX26_02873 0.28 +0.3 2,970,431 + MPMX26_02873 0.31 -0.3 2,970,589 - MPMX26_02873 0.46 -0.3 2,970,992 - MPMX26_02873 0.84 -0.1 2,971,089 + +0.4 2,971,121 + -0.1 2,971,231 - +0.2 2,971,272 - +0.9 2,971,277 - +1.6 2,971,386 - +0.2 2,971,402 - +0.2 2,971,425 - +0.6 2,971,425 - +2.0 2,971,477 - MPMX26_02874 0.14 -0.5 2,971,477 - MPMX26_02874 0.14 +1.4 2,971,483 - MPMX26_02874 0.14 +2.9 2,971,483 - MPMX26_02874 0.14 +1.8 2,971,483 - MPMX26_02874 0.14 +0.3 2,971,658 - MPMX26_02874 0.31 -1.5 2,971,688 - MPMX26_02874 0.34 +1.2 2,971,709 - MPMX26_02874 0.36 +0.1 2,971,709 - MPMX26_02874 0.36 -0.8 2,971,709 - MPMX26_02874 0.36 +1.8 2,971,709 - MPMX26_02874 0.36 +0.6 2,971,813 - MPMX26_02874 0.46 +0.8 2,971,838 - MPMX26_02874 0.49 +1.1 2,971,846 - MPMX26_02874 0.50 +0.1 2,971,887 + MPMX26_02874 0.54 +1.4 2,971,887 - MPMX26_02874 0.54 +0.5 2,971,939 - MPMX26_02874 0.59 -0.7 2,971,987 - MPMX26_02874 0.63 -0.5 2,972,137 - MPMX26_02874 0.78 +0.2
Or see this region's nucleotide sequence