Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01992

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01991 and MPMX26_01992 are separated by 334 nucleotidesMPMX26_01992 and MPMX26_01993 are separated by 13 nucleotidesMPMX26_01993 and MPMX26_01994 overlap by 4 nucleotides MPMX26_01991: MPMX26_01991 - Glutarate-semialdehyde dehydrogenase, at 2,049,642 to 2,051,090 _01991 MPMX26_01992: MPMX26_01992 - putative metallo-hydrolase, at 2,051,425 to 2,052,297 _01992 MPMX26_01993: MPMX26_01993 - hypothetical protein, at 2,052,311 to 2,052,724 _01993 MPMX26_01994: MPMX26_01994 - hypothetical protein, at 2,052,721 to 2,053,143 _01994 Position (kb) 2051 2052 2053Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2050.452 kb on - strand, within MPMX26_01991at 2050.464 kb on - strand, within MPMX26_01991at 2050.464 kb on - strand, within MPMX26_01991at 2050.464 kb on - strand, within MPMX26_01991at 2050.481 kb on - strand, within MPMX26_01991at 2050.515 kb on - strand, within MPMX26_01991at 2050.520 kb on - strand, within MPMX26_01991at 2050.521 kb on - strand, within MPMX26_01991at 2050.521 kb on - strand, within MPMX26_01991at 2050.521 kb on - strand, within MPMX26_01991at 2050.557 kb on - strand, within MPMX26_01991at 2050.562 kb on - strand, within MPMX26_01991at 2050.562 kb on - strand, within MPMX26_01991at 2050.562 kb on - strand, within MPMX26_01991at 2050.562 kb on - strand, within MPMX26_01991at 2050.572 kb on - strand, within MPMX26_01991at 2050.599 kb on - strand, within MPMX26_01991at 2050.610 kb on - strand, within MPMX26_01991at 2050.706 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.797 kb on - strand, within MPMX26_01991at 2050.802 kb on - strand, within MPMX26_01991at 2050.802 kb on - strand, within MPMX26_01991at 2050.898 kb on - strand, within MPMX26_01991at 2050.898 kb on - strand, within MPMX26_01991at 2050.898 kb on - strand, within MPMX26_01991at 2050.910 kb on - strand, within MPMX26_01991at 2050.910 kb on - strand, within MPMX26_01991at 2050.910 kb on - strand, within MPMX26_01991at 2050.964 kb on - strandat 2050.985 kb on - strandat 2050.985 kb on - strandat 2051.019 kb on - strandat 2051.034 kb on - strandat 2051.042 kb on - strandat 2052.196 kb on + strand, within MPMX26_01992at 2052.390 kb on - strand, within MPMX26_01993

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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2,050,452 - MPMX26_01991 0.56 +0.0
2,050,464 - MPMX26_01991 0.57 +0.5
2,050,464 - MPMX26_01991 0.57 +0.2
2,050,464 - MPMX26_01991 0.57 +1.0
2,050,481 - MPMX26_01991 0.58 -0.1
2,050,515 - MPMX26_01991 0.60 -0.1
2,050,520 - MPMX26_01991 0.61 -0.4
2,050,521 - MPMX26_01991 0.61 +0.5
2,050,521 - MPMX26_01991 0.61 +0.3
2,050,521 - MPMX26_01991 0.61 +1.1
2,050,557 - MPMX26_01991 0.63 -3.0
2,050,562 - MPMX26_01991 0.63 +0.4
2,050,562 - MPMX26_01991 0.63 -0.4
2,050,562 - MPMX26_01991 0.63 +1.0
2,050,562 - MPMX26_01991 0.63 -0.8
2,050,572 - MPMX26_01991 0.64 +1.1
2,050,599 - MPMX26_01991 0.66 -0.2
2,050,610 - MPMX26_01991 0.67 +0.4
2,050,706 - MPMX26_01991 0.73 +3.4
2,050,797 - MPMX26_01991 0.80 -0.2
2,050,797 - MPMX26_01991 0.80 -0.1
2,050,797 - MPMX26_01991 0.80 -1.4
2,050,797 - MPMX26_01991 0.80 -0.8
2,050,797 - MPMX26_01991 0.80 -0.3
2,050,797 - MPMX26_01991 0.80 +0.1
2,050,797 - MPMX26_01991 0.80 -0.5
2,050,797 - MPMX26_01991 0.80 -0.9
2,050,802 - MPMX26_01991 0.80 +0.7
2,050,802 - MPMX26_01991 0.80 +0.4
2,050,898 - MPMX26_01991 0.87 +1.2
2,050,898 - MPMX26_01991 0.87 +0.3
2,050,898 - MPMX26_01991 0.87 +0.2
2,050,910 - MPMX26_01991 0.88 -0.4
2,050,910 - MPMX26_01991 0.88 -1.0
2,050,910 - MPMX26_01991 0.88 +0.8
2,050,964 - +1.4
2,050,985 - +1.2
2,050,985 - -0.0
2,051,019 - +2.2
2,051,034 - +2.1
2,051,042 - +0.1
2,052,196 + MPMX26_01992 0.88 +0.4
2,052,390 - MPMX26_01993 0.19 +0.4

Or see this region's nucleotide sequence