Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01874 and MPMX26_01875 are separated by 884 nucleotides MPMX26_01875 and MPMX26_01876 are separated by 19 nucleotides MPMX26_01876 and MPMX26_01877 overlap by 8 nucleotides
MPMX26_01874: MPMX26_01874 - D-methionine transport system permease protein MetI, at 1,912,858 to 1,913,553
_01874
MPMX26_01875: MPMX26_01875 - DNA polymerase III subunit alpha, at 1,914,438 to 1,918,004
_01875
MPMX26_01876: MPMX26_01876 - tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ, at 1,918,024 to 1,918,866
_01876
MPMX26_01877: MPMX26_01877 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, at 1,918,859 to 1,919,677
_01877
Position (kb)
1914
1915
1916
1917
1918
1919 Strain fitness (log2 ratio)
-1
0
1 at 1913.528 kb on + strand at 1913.533 kb on + strand at 1917.881 kb on + strand at 1917.881 kb on + strand at 1917.891 kb on + strand at 1917.899 kb on + strand at 1917.920 kb on + strand at 1917.920 kb on + strand at 1917.945 kb on + strand at 1917.946 kb on + strand at 1917.964 kb on + strand at 1918.057 kb on + strand at 1918.086 kb on + strand at 1918.088 kb on + strand at 1918.091 kb on + strand at 1918.105 kb on + strand at 1918.111 kb on + strand, within MPMX26_01876 at 1918.117 kb on + strand, within MPMX26_01876 at 1918.136 kb on + strand, within MPMX26_01876 at 1918.183 kb on + strand, within MPMX26_01876 at 1918.203 kb on + strand, within MPMX26_01876 at 1918.203 kb on + strand, within MPMX26_01876 at 1918.208 kb on + strand, within MPMX26_01876 at 1918.223 kb on + strand, within MPMX26_01876 at 1918.233 kb on + strand, within MPMX26_01876 at 1918.233 kb on + strand, within MPMX26_01876 at 1918.233 kb on + strand, within MPMX26_01876 at 1918.250 kb on + strand, within MPMX26_01876 at 1918.264 kb on + strand, within MPMX26_01876 at 1918.264 kb on + strand, within MPMX26_01876 at 1918.302 kb on + strand, within MPMX26_01876 at 1918.324 kb on + strand, within MPMX26_01876 at 1918.324 kb on + strand, within MPMX26_01876 at 1918.324 kb on + strand, within MPMX26_01876 at 1918.345 kb on + strand, within MPMX26_01876 at 1918.345 kb on + strand, within MPMX26_01876 at 1918.352 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.396 kb on + strand, within MPMX26_01876 at 1918.412 kb on + strand, within MPMX26_01876 at 1918.412 kb on + strand, within MPMX26_01876 at 1918.417 kb on + strand, within MPMX26_01876 at 1918.422 kb on + strand, within MPMX26_01876 at 1918.433 kb on + strand, within MPMX26_01876 at 1918.462 kb on + strand, within MPMX26_01876 at 1918.467 kb on + strand, within MPMX26_01876 at 1918.467 kb on + strand, within MPMX26_01876 at 1918.488 kb on + strand, within MPMX26_01876 at 1918.493 kb on + strand, within MPMX26_01876 at 1918.530 kb on + strand, within MPMX26_01876 at 1918.535 kb on + strand, within MPMX26_01876 at 1918.535 kb on + strand, within MPMX26_01876 at 1918.541 kb on + strand, within MPMX26_01876 at 1918.549 kb on + strand, within MPMX26_01876 at 1918.551 kb on + strand, within MPMX26_01876 at 1918.551 kb on + strand, within MPMX26_01876 at 1918.599 kb on + strand, within MPMX26_01876 at 1918.599 kb on + strand, within MPMX26_01876 at 1918.599 kb on + strand, within MPMX26_01876 at 1918.599 kb on + strand, within MPMX26_01876 at 1918.603 kb on + strand, within MPMX26_01876 at 1918.608 kb on + strand, within MPMX26_01876 at 1918.613 kb on + strand, within MPMX26_01876 at 1918.613 kb on + strand, within MPMX26_01876 at 1918.613 kb on + strand, within MPMX26_01876 at 1918.626 kb on + strand, within MPMX26_01876 at 1918.650 kb on + strand, within MPMX26_01876 at 1918.650 kb on + strand, within MPMX26_01876 at 1918.650 kb on + strand, within MPMX26_01876 at 1918.650 kb on + strand, within MPMX26_01876 at 1918.650 kb on + strand, within MPMX26_01876 at 1918.713 kb on + strand, within MPMX26_01876 at 1918.713 kb on + strand, within MPMX26_01876 at 1918.745 kb on + strand, within MPMX26_01876 at 1918.753 kb on + strand, within MPMX26_01876 at 1918.800 kb on + strand at 1918.807 kb on + strand at 1918.807 kb on + strand at 1918.812 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,913,528 + -0.5 1,913,533 + -0.3 1,917,881 + -0.4 1,917,881 + -0.4 1,917,891 + -0.1 1,917,899 + -0.2 1,917,920 + -1.3 1,917,920 + +0.7 1,917,945 + -1.1 1,917,946 + +1.0 1,917,964 + +0.4 1,918,057 + +0.3 1,918,086 + -0.2 1,918,088 + -0.1 1,918,091 + +0.1 1,918,105 + -1.1 1,918,111 + MPMX26_01876 0.10 +0.4 1,918,117 + MPMX26_01876 0.11 -0.8 1,918,136 + MPMX26_01876 0.13 +0.0 1,918,183 + MPMX26_01876 0.19 +0.4 1,918,203 + MPMX26_01876 0.21 +0.5 1,918,203 + MPMX26_01876 0.21 +0.4 1,918,208 + MPMX26_01876 0.22 +0.4 1,918,223 + MPMX26_01876 0.24 +0.0 1,918,233 + MPMX26_01876 0.25 -0.1 1,918,233 + MPMX26_01876 0.25 -0.0 1,918,233 + MPMX26_01876 0.25 +0.0 1,918,250 + MPMX26_01876 0.27 +0.6 1,918,264 + MPMX26_01876 0.28 +0.3 1,918,264 + MPMX26_01876 0.28 -0.7 1,918,302 + MPMX26_01876 0.33 +0.8 1,918,324 + MPMX26_01876 0.36 +0.8 1,918,324 + MPMX26_01876 0.36 +0.5 1,918,324 + MPMX26_01876 0.36 +0.1 1,918,345 + MPMX26_01876 0.38 +0.6 1,918,345 + MPMX26_01876 0.38 -1.1 1,918,352 + MPMX26_01876 0.39 +0.8 1,918,396 + MPMX26_01876 0.44 -0.2 1,918,396 + MPMX26_01876 0.44 -0.1 1,918,396 + MPMX26_01876 0.44 +1.1 1,918,396 + MPMX26_01876 0.44 -0.8 1,918,396 + MPMX26_01876 0.44 +0.0 1,918,396 + MPMX26_01876 0.44 -1.4 1,918,396 + MPMX26_01876 0.44 +0.2 1,918,412 + MPMX26_01876 0.46 -0.8 1,918,412 + MPMX26_01876 0.46 +0.0 1,918,417 + MPMX26_01876 0.47 -0.3 1,918,422 + MPMX26_01876 0.47 +0.3 1,918,433 + MPMX26_01876 0.49 +0.6 1,918,462 + MPMX26_01876 0.52 -0.4 1,918,467 + MPMX26_01876 0.53 +0.6 1,918,467 + MPMX26_01876 0.53 +0.2 1,918,488 + MPMX26_01876 0.55 +0.0 1,918,493 + MPMX26_01876 0.56 +0.7 1,918,530 + MPMX26_01876 0.60 -0.6 1,918,535 + MPMX26_01876 0.61 +0.5 1,918,535 + MPMX26_01876 0.61 +0.7 1,918,541 + MPMX26_01876 0.61 -0.1 1,918,549 + MPMX26_01876 0.62 -0.3 1,918,551 + MPMX26_01876 0.63 +0.1 1,918,551 + MPMX26_01876 0.63 -0.1 1,918,599 + MPMX26_01876 0.68 +0.4 1,918,599 + MPMX26_01876 0.68 +0.5 1,918,599 + MPMX26_01876 0.68 -0.9 1,918,599 + MPMX26_01876 0.68 +0.5 1,918,603 + MPMX26_01876 0.69 -0.6 1,918,608 + MPMX26_01876 0.69 -1.5 1,918,613 + MPMX26_01876 0.70 +0.4 1,918,613 + MPMX26_01876 0.70 -0.2 1,918,613 + MPMX26_01876 0.70 +0.2 1,918,626 + MPMX26_01876 0.71 +0.1 1,918,650 + MPMX26_01876 0.74 +0.4 1,918,650 + MPMX26_01876 0.74 +0.4 1,918,650 + MPMX26_01876 0.74 -0.7 1,918,650 + MPMX26_01876 0.74 -0.2 1,918,650 + MPMX26_01876 0.74 -0.1 1,918,713 + MPMX26_01876 0.82 -1.4 1,918,713 + MPMX26_01876 0.82 +0.2 1,918,745 + MPMX26_01876 0.86 -0.4 1,918,753 + MPMX26_01876 0.86 -0.3 1,918,800 + +0.2 1,918,807 + +0.7 1,918,807 + +0.2 1,918,812 + -0.2
Or see this region's nucleotide sequence