Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01859 and MPMX26_01860 overlap by 20 nucleotides MPMX26_01860 and MPMX26_01861 are separated by 105 nucleotides
MPMX26_01859: MPMX26_01859 - Methionine import ATP-binding protein MetN, at 1,897,027 to 1,898,097
_01859
MPMX26_01860: MPMX26_01860 - Methionine import system permease protein MetP, at 1,898,078 to 1,898,737
_01860
MPMX26_01861: MPMX26_01861 - Ribosome-binding ATPase YchF, at 1,898,843 to 1,899,934
_01861
Position (kb)
1898
1899 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1898.295 kb on - strand, within MPMX26_01860 at 1898.305 kb on - strand, within MPMX26_01860 at 1898.861 kb on + strand at 1898.871 kb on + strand at 1898.886 kb on + strand at 1898.908 kb on + strand at 1898.908 kb on + strand at 1898.927 kb on + strand at 1898.967 kb on + strand, within MPMX26_01861 at 1898.990 kb on + strand, within MPMX26_01861 at 1898.990 kb on + strand, within MPMX26_01861 at 1898.995 kb on + strand, within MPMX26_01861 at 1899.011 kb on + strand, within MPMX26_01861 at 1899.012 kb on + strand, within MPMX26_01861 at 1899.027 kb on + strand, within MPMX26_01861 at 1899.027 kb on + strand, within MPMX26_01861 at 1899.060 kb on + strand, within MPMX26_01861 at 1899.082 kb on + strand, within MPMX26_01861 at 1899.082 kb on + strand, within MPMX26_01861 at 1899.089 kb on + strand, within MPMX26_01861 at 1899.095 kb on + strand, within MPMX26_01861 at 1899.190 kb on + strand, within MPMX26_01861 at 1899.209 kb on + strand, within MPMX26_01861 at 1899.224 kb on + strand, within MPMX26_01861 at 1899.238 kb on + strand, within MPMX26_01861 at 1899.248 kb on + strand, within MPMX26_01861 at 1899.322 kb on + strand, within MPMX26_01861 at 1899.354 kb on + strand, within MPMX26_01861 at 1899.358 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.364 kb on + strand, within MPMX26_01861 at 1899.370 kb on + strand, within MPMX26_01861 at 1899.548 kb on + strand, within MPMX26_01861 at 1899.550 kb on + strand, within MPMX26_01861 at 1899.587 kb on + strand, within MPMX26_01861 at 1899.602 kb on + strand, within MPMX26_01861 at 1899.604 kb on + strand, within MPMX26_01861 at 1899.619 kb on + strand, within MPMX26_01861 at 1899.659 kb on + strand, within MPMX26_01861 at 1899.700 kb on + strand, within MPMX26_01861
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,898,295 - MPMX26_01860 0.33 +2.0 1,898,305 - MPMX26_01860 0.34 +0.4 1,898,861 + +0.6 1,898,871 + +0.9 1,898,886 + -0.2 1,898,908 + +1.1 1,898,908 + -0.8 1,898,927 + -0.2 1,898,967 + MPMX26_01861 0.11 -0.6 1,898,990 + MPMX26_01861 0.13 +1.2 1,898,990 + MPMX26_01861 0.13 +0.9 1,898,995 + MPMX26_01861 0.14 -0.2 1,899,011 + MPMX26_01861 0.15 +0.9 1,899,012 + MPMX26_01861 0.15 -1.9 1,899,027 + MPMX26_01861 0.17 +0.0 1,899,027 + MPMX26_01861 0.17 -0.4 1,899,060 + MPMX26_01861 0.20 +0.2 1,899,082 + MPMX26_01861 0.22 -1.0 1,899,082 + MPMX26_01861 0.22 -0.1 1,899,089 + MPMX26_01861 0.23 -0.1 1,899,095 + MPMX26_01861 0.23 +0.1 1,899,190 + MPMX26_01861 0.32 -1.1 1,899,209 + MPMX26_01861 0.34 -0.2 1,899,224 + MPMX26_01861 0.35 -0.2 1,899,238 + MPMX26_01861 0.36 -0.3 1,899,248 + MPMX26_01861 0.37 -0.1 1,899,322 + MPMX26_01861 0.44 +1.8 1,899,354 + MPMX26_01861 0.47 -1.7 1,899,358 + MPMX26_01861 0.47 -0.4 1,899,364 + MPMX26_01861 0.48 -0.6 1,899,364 + MPMX26_01861 0.48 -1.9 1,899,364 + MPMX26_01861 0.48 +0.5 1,899,364 + MPMX26_01861 0.48 +1.3 1,899,364 + MPMX26_01861 0.48 -1.1 1,899,364 + MPMX26_01861 0.48 -1.2 1,899,364 + MPMX26_01861 0.48 +0.7 1,899,364 + MPMX26_01861 0.48 +0.3 1,899,364 + MPMX26_01861 0.48 -0.4 1,899,364 + MPMX26_01861 0.48 +1.8 1,899,364 + MPMX26_01861 0.48 -0.7 1,899,364 + MPMX26_01861 0.48 +0.2 1,899,364 + MPMX26_01861 0.48 -0.7 1,899,370 + MPMX26_01861 0.48 -0.8 1,899,548 + MPMX26_01861 0.65 +0.2 1,899,550 + MPMX26_01861 0.65 +0.6 1,899,587 + MPMX26_01861 0.68 +0.5 1,899,602 + MPMX26_01861 0.70 +0.8 1,899,604 + MPMX26_01861 0.70 +0.2 1,899,619 + MPMX26_01861 0.71 -0.4 1,899,659 + MPMX26_01861 0.75 -0.3 1,899,700 + MPMX26_01861 0.78 +0.0
Or see this region's nucleotide sequence