Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01307

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01306 and MPMX26_01307 are separated by 444 nucleotidesMPMX26_01307 and MPMX26_01308 are separated by 53 nucleotides MPMX26_01306: MPMX26_01306 - Cell division coordinator CpoB, at 1,382,788 to 1,383,612 _01306 MPMX26_01307: MPMX26_01307 - Regulatory protein RecX, at 1,384,057 to 1,384,542 _01307 MPMX26_01308: MPMX26_01308 - Protein RecA, at 1,384,596 to 1,385,642 _01308 Position (kb) 1384 1385Strain fitness (log2 ratio) -1 0 1 2at 1383.090 kb on - strand, within MPMX26_01306at 1383.106 kb on - strand, within MPMX26_01306at 1383.126 kb on - strand, within MPMX26_01306at 1383.139 kb on - strand, within MPMX26_01306at 1383.139 kb on - strand, within MPMX26_01306at 1383.181 kb on - strand, within MPMX26_01306at 1383.181 kb on - strand, within MPMX26_01306at 1383.271 kb on - strand, within MPMX26_01306at 1383.289 kb on - strand, within MPMX26_01306at 1383.393 kb on - strand, within MPMX26_01306at 1383.400 kb on - strand, within MPMX26_01306at 1383.457 kb on - strand, within MPMX26_01306at 1383.477 kb on - strand, within MPMX26_01306at 1383.477 kb on - strand, within MPMX26_01306at 1383.505 kb on - strand, within MPMX26_01306at 1383.513 kb on - strand, within MPMX26_01306at 1383.513 kb on - strand, within MPMX26_01306at 1383.513 kb on - strand, within MPMX26_01306at 1383.513 kb on - strand, within MPMX26_01306at 1383.567 kb on - strandat 1383.567 kb on - strandat 1383.567 kb on - strandat 1383.567 kb on - strandat 1383.577 kb on - strandat 1383.577 kb on - strandat 1383.577 kb on - strandat 1383.577 kb on - strandat 1383.577 kb on - strandat 1383.577 kb on - strandat 1383.582 kb on - strandat 1384.054 kb on + strandat 1384.054 kb on + strandat 1384.137 kb on + strand, within MPMX26_01307at 1384.619 kb on - strandat 1384.668 kb on - strandat 1384.668 kb on - strandat 1384.668 kb on - strandat 1384.668 kb on - strandat 1384.668 kb on - strandat 1384.668 kb on - strandat 1384.683 kb on - strandat 1384.745 kb on - strand, within MPMX26_01308at 1384.902 kb on - strand, within MPMX26_01308at 1384.956 kb on - strand, within MPMX26_01308at 1384.956 kb on - strand, within MPMX26_01308at 1385.025 kb on - strand, within MPMX26_01308at 1385.088 kb on - strand, within MPMX26_01308at 1385.121 kb on - strand, within MPMX26_01308at 1385.131 kb on - strand, within MPMX26_01308at 1385.131 kb on - strand, within MPMX26_01308at 1385.204 kb on - strand, within MPMX26_01308at 1385.204 kb on - strand, within MPMX26_01308at 1385.204 kb on - strand, within MPMX26_01308at 1385.244 kb on - strand, within MPMX26_01308at 1385.333 kb on - strand, within MPMX26_01308at 1385.400 kb on - strand, within MPMX26_01308at 1385.435 kb on - strand, within MPMX26_01308at 1385.435 kb on - strand, within MPMX26_01308at 1385.454 kb on - strand, within MPMX26_01308at 1385.528 kb on - strand, within MPMX26_01308

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,383,090 - MPMX26_01306 0.37 +0.1
1,383,106 - MPMX26_01306 0.39 +0.6
1,383,126 - MPMX26_01306 0.41 +0.4
1,383,139 - MPMX26_01306 0.43 +0.7
1,383,139 - MPMX26_01306 0.43 +0.4
1,383,181 - MPMX26_01306 0.48 -0.0
1,383,181 - MPMX26_01306 0.48 -0.1
1,383,271 - MPMX26_01306 0.59 -0.2
1,383,289 - MPMX26_01306 0.61 +0.5
1,383,393 - MPMX26_01306 0.73 -0.1
1,383,400 - MPMX26_01306 0.74 -0.2
1,383,457 - MPMX26_01306 0.81 -0.3
1,383,477 - MPMX26_01306 0.84 +0.3
1,383,477 - MPMX26_01306 0.84 -0.3
1,383,505 - MPMX26_01306 0.87 -0.2
1,383,513 - MPMX26_01306 0.88 +1.1
1,383,513 - MPMX26_01306 0.88 +0.2
1,383,513 - MPMX26_01306 0.88 +0.5
1,383,513 - MPMX26_01306 0.88 +1.2
1,383,567 - +0.1
1,383,567 - -0.8
1,383,567 - +0.9
1,383,567 - +0.2
1,383,577 - +0.2
1,383,577 - +0.6
1,383,577 - -0.0
1,383,577 - +1.0
1,383,577 - +0.1
1,383,577 - -0.2
1,383,582 - -0.1
1,384,054 + +0.2
1,384,054 + -0.3
1,384,137 + MPMX26_01307 0.16 -1.2
1,384,619 - +0.8
1,384,668 - +0.4
1,384,668 - +0.2
1,384,668 - +0.8
1,384,668 - -0.2
1,384,668 - -0.3
1,384,668 - -0.5
1,384,683 - -0.2
1,384,745 - MPMX26_01308 0.14 +1.8
1,384,902 - MPMX26_01308 0.29 -0.2
1,384,956 - MPMX26_01308 0.34 +0.4
1,384,956 - MPMX26_01308 0.34 -0.2
1,385,025 - MPMX26_01308 0.41 -0.9
1,385,088 - MPMX26_01308 0.47 +1.1
1,385,121 - MPMX26_01308 0.50 +0.9
1,385,131 - MPMX26_01308 0.51 +0.6
1,385,131 - MPMX26_01308 0.51 -0.6
1,385,204 - MPMX26_01308 0.58 +1.7
1,385,204 - MPMX26_01308 0.58 +0.6
1,385,204 - MPMX26_01308 0.58 +0.5
1,385,244 - MPMX26_01308 0.62 +0.2
1,385,333 - MPMX26_01308 0.70 -0.4
1,385,400 - MPMX26_01308 0.77 +0.6
1,385,435 - MPMX26_01308 0.80 +0.4
1,385,435 - MPMX26_01308 0.80 +2.2
1,385,454 - MPMX26_01308 0.82 +1.0
1,385,528 - MPMX26_01308 0.89 +1.1

Or see this region's nucleotide sequence