Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01306 and MPMX26_01307 are separated by 444 nucleotides MPMX26_01307 and MPMX26_01308 are separated by 53 nucleotides
MPMX26_01306: MPMX26_01306 - Cell division coordinator CpoB, at 1,382,788 to 1,383,612
_01306
MPMX26_01307: MPMX26_01307 - Regulatory protein RecX, at 1,384,057 to 1,384,542
_01307
MPMX26_01308: MPMX26_01308 - Protein RecA, at 1,384,596 to 1,385,642
_01308
Position (kb)
1384
1385 Strain fitness (log2 ratio)
-1
0
1
2 at 1383.090 kb on - strand, within MPMX26_01306 at 1383.106 kb on - strand, within MPMX26_01306 at 1383.126 kb on - strand, within MPMX26_01306 at 1383.139 kb on - strand, within MPMX26_01306 at 1383.139 kb on - strand, within MPMX26_01306 at 1383.181 kb on - strand, within MPMX26_01306 at 1383.181 kb on - strand, within MPMX26_01306 at 1383.271 kb on - strand, within MPMX26_01306 at 1383.289 kb on - strand, within MPMX26_01306 at 1383.393 kb on - strand, within MPMX26_01306 at 1383.400 kb on - strand, within MPMX26_01306 at 1383.457 kb on - strand, within MPMX26_01306 at 1383.477 kb on - strand, within MPMX26_01306 at 1383.477 kb on - strand, within MPMX26_01306 at 1383.505 kb on - strand, within MPMX26_01306 at 1383.513 kb on - strand, within MPMX26_01306 at 1383.513 kb on - strand, within MPMX26_01306 at 1383.513 kb on - strand, within MPMX26_01306 at 1383.513 kb on - strand, within MPMX26_01306 at 1383.567 kb on - strand at 1383.567 kb on - strand at 1383.567 kb on - strand at 1383.567 kb on - strand at 1383.577 kb on - strand at 1383.577 kb on - strand at 1383.577 kb on - strand at 1383.577 kb on - strand at 1383.577 kb on - strand at 1383.577 kb on - strand at 1383.582 kb on - strand at 1384.054 kb on + strand at 1384.054 kb on + strand at 1384.137 kb on + strand, within MPMX26_01307 at 1384.619 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.668 kb on - strand at 1384.683 kb on - strand at 1384.745 kb on - strand, within MPMX26_01308 at 1384.902 kb on - strand, within MPMX26_01308 at 1384.956 kb on - strand, within MPMX26_01308 at 1384.956 kb on - strand, within MPMX26_01308 at 1385.025 kb on - strand, within MPMX26_01308 at 1385.088 kb on - strand, within MPMX26_01308 at 1385.121 kb on - strand, within MPMX26_01308 at 1385.131 kb on - strand, within MPMX26_01308 at 1385.131 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.204 kb on - strand, within MPMX26_01308 at 1385.244 kb on - strand, within MPMX26_01308 at 1385.333 kb on - strand, within MPMX26_01308 at 1385.400 kb on - strand, within MPMX26_01308 at 1385.435 kb on - strand, within MPMX26_01308 at 1385.435 kb on - strand, within MPMX26_01308 at 1385.454 kb on - strand, within MPMX26_01308 at 1385.528 kb on - strand, within MPMX26_01308
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,383,090 - MPMX26_01306 0.37 +0.1 1,383,106 - MPMX26_01306 0.39 +0.6 1,383,126 - MPMX26_01306 0.41 +0.4 1,383,139 - MPMX26_01306 0.43 +0.7 1,383,139 - MPMX26_01306 0.43 +0.4 1,383,181 - MPMX26_01306 0.48 -0.0 1,383,181 - MPMX26_01306 0.48 -0.1 1,383,271 - MPMX26_01306 0.59 -0.2 1,383,289 - MPMX26_01306 0.61 +0.5 1,383,393 - MPMX26_01306 0.73 -0.1 1,383,400 - MPMX26_01306 0.74 -0.2 1,383,457 - MPMX26_01306 0.81 -0.3 1,383,477 - MPMX26_01306 0.84 +0.3 1,383,477 - MPMX26_01306 0.84 -0.3 1,383,505 - MPMX26_01306 0.87 -0.2 1,383,513 - MPMX26_01306 0.88 +1.1 1,383,513 - MPMX26_01306 0.88 +0.2 1,383,513 - MPMX26_01306 0.88 +0.5 1,383,513 - MPMX26_01306 0.88 +1.2 1,383,567 - +0.1 1,383,567 - -0.8 1,383,567 - +0.9 1,383,567 - +0.2 1,383,577 - +0.2 1,383,577 - +0.6 1,383,577 - -0.0 1,383,577 - +1.0 1,383,577 - +0.1 1,383,577 - -0.2 1,383,582 - -0.1 1,384,054 + +0.2 1,384,054 + -0.3 1,384,137 + MPMX26_01307 0.16 -1.2 1,384,619 - +0.8 1,384,668 - +0.4 1,384,668 - +0.2 1,384,668 - +0.8 1,384,668 - -0.2 1,384,668 - -0.3 1,384,668 - -0.5 1,384,683 - -0.2 1,384,745 - MPMX26_01308 0.14 +1.8 1,384,902 - MPMX26_01308 0.29 -0.2 1,384,956 - MPMX26_01308 0.34 +0.4 1,384,956 - MPMX26_01308 0.34 -0.2 1,385,025 - MPMX26_01308 0.41 -0.9 1,385,088 - MPMX26_01308 0.47 +1.1 1,385,121 - MPMX26_01308 0.50 +0.9 1,385,131 - MPMX26_01308 0.51 +0.6 1,385,131 - MPMX26_01308 0.51 -0.6 1,385,204 - MPMX26_01308 0.58 +1.7 1,385,204 - MPMX26_01308 0.58 +0.6 1,385,204 - MPMX26_01308 0.58 +0.5 1,385,244 - MPMX26_01308 0.62 +0.2 1,385,333 - MPMX26_01308 0.70 -0.4 1,385,400 - MPMX26_01308 0.77 +0.6 1,385,435 - MPMX26_01308 0.80 +0.4 1,385,435 - MPMX26_01308 0.80 +2.2 1,385,454 - MPMX26_01308 0.82 +1.0 1,385,528 - MPMX26_01308 0.89 +1.1
Or see this region's nucleotide sequence