Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01284 and MPMX26_01285 are separated by 55 nucleotides MPMX26_01285 and MPMX26_01286 are separated by 35 nucleotides MPMX26_01286 and MPMX26_01287 are separated by 94 nucleotides
MPMX26_01284: MPMX26_01284 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 1,359,328 to 1,361,604
_01284
MPMX26_01285: MPMX26_01285 - hypothetical protein, at 1,361,660 to 1,362,013
_01285
MPMX26_01286: MPMX26_01286 - hypothetical protein, at 1,362,049 to 1,362,516
_01286
MPMX26_01287: MPMX26_01287 - Ornithine carbamoyltransferase 1, anabolic, at 1,362,611 to 1,363,531
_01287
Position (kb)
1361
1362
1363 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1360.671 kb on + strand, within MPMX26_01284 at 1360.713 kb on + strand, within MPMX26_01284 at 1360.713 kb on + strand, within MPMX26_01284 at 1360.713 kb on + strand, within MPMX26_01284 at 1360.713 kb on + strand, within MPMX26_01284 at 1360.734 kb on + strand, within MPMX26_01284 at 1360.758 kb on + strand, within MPMX26_01284 at 1360.763 kb on + strand, within MPMX26_01284 at 1360.877 kb on + strand, within MPMX26_01284 at 1360.904 kb on + strand, within MPMX26_01284 at 1360.920 kb on + strand, within MPMX26_01284 at 1360.933 kb on + strand, within MPMX26_01284 at 1360.933 kb on + strand, within MPMX26_01284 at 1360.933 kb on + strand, within MPMX26_01284 at 1360.939 kb on + strand, within MPMX26_01284 at 1360.948 kb on + strand, within MPMX26_01284 at 1360.954 kb on + strand, within MPMX26_01284 at 1360.975 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.000 kb on + strand, within MPMX26_01284 at 1361.042 kb on + strand, within MPMX26_01284 at 1361.064 kb on + strand, within MPMX26_01284 at 1361.068 kb on + strand, within MPMX26_01284 at 1361.127 kb on + strand, within MPMX26_01284 at 1361.190 kb on + strand, within MPMX26_01284 at 1361.190 kb on + strand, within MPMX26_01284 at 1361.190 kb on + strand, within MPMX26_01284 at 1361.190 kb on + strand, within MPMX26_01284 at 1361.190 kb on + strand, within MPMX26_01284 at 1361.208 kb on + strand, within MPMX26_01284 at 1361.229 kb on + strand, within MPMX26_01284 at 1361.229 kb on + strand, within MPMX26_01284 at 1361.246 kb on + strand, within MPMX26_01284 at 1361.300 kb on + strand, within MPMX26_01284 at 1361.316 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.370 kb on + strand, within MPMX26_01284 at 1361.390 kb on + strand at 1361.398 kb on + strand at 1361.398 kb on + strand at 1361.398 kb on + strand at 1361.398 kb on + strand at 1361.403 kb on + strand at 1361.403 kb on + strand at 1361.403 kb on + strand at 1361.403 kb on + strand at 1361.403 kb on + strand at 1361.404 kb on + strand at 1361.405 kb on + strand at 1361.415 kb on + strand at 1361.415 kb on + strand at 1361.429 kb on + strand at 1361.429 kb on + strand at 1361.429 kb on + strand at 1361.429 kb on + strand at 1361.439 kb on + strand at 1361.441 kb on + strand at 1361.499 kb on + strand at 1361.545 kb on + strand at 1361.599 kb on + strand at 1361.599 kb on + strand at 1361.610 kb on + strand at 1361.617 kb on + strand at 1361.617 kb on + strand at 1362.617 kb on - strand at 1362.617 kb on - strand at 1362.617 kb on - strand at 1362.617 kb on - strand at 1362.697 kb on - strand at 1362.753 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.758 kb on - strand, within MPMX26_01287 at 1362.781 kb on - strand, within MPMX26_01287 at 1362.781 kb on - strand, within MPMX26_01287 at 1362.781 kb on - strand, within MPMX26_01287 at 1362.781 kb on - strand, within MPMX26_01287 at 1362.789 kb on - strand, within MPMX26_01287 at 1362.815 kb on - strand, within MPMX26_01287 at 1362.837 kb on - strand, within MPMX26_01287 at 1362.864 kb on - strand, within MPMX26_01287 at 1362.874 kb on - strand, within MPMX26_01287 at 1362.874 kb on - strand, within MPMX26_01287 at 1362.882 kb on - strand, within MPMX26_01287 at 1362.887 kb on - strand, within MPMX26_01287 at 1362.918 kb on - strand, within MPMX26_01287 at 1362.928 kb on - strand, within MPMX26_01287 at 1362.928 kb on - strand, within MPMX26_01287 at 1362.928 kb on - strand, within MPMX26_01287 at 1362.936 kb on - strand, within MPMX26_01287 at 1362.936 kb on - strand, within MPMX26_01287 at 1362.978 kb on - strand, within MPMX26_01287 at 1362.978 kb on - strand, within MPMX26_01287 at 1362.978 kb on - strand, within MPMX26_01287
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,360,671 + MPMX26_01284 0.59 -1.8 1,360,713 + MPMX26_01284 0.61 -2.2 1,360,713 + MPMX26_01284 0.61 +0.8 1,360,713 + MPMX26_01284 0.61 -2.8 1,360,713 + MPMX26_01284 0.61 +0.1 1,360,734 + MPMX26_01284 0.62 -1.6 1,360,758 + MPMX26_01284 0.63 -1.3 1,360,763 + MPMX26_01284 0.63 -1.3 1,360,877 + MPMX26_01284 0.68 -0.1 1,360,904 + MPMX26_01284 0.69 -1.6 1,360,920 + MPMX26_01284 0.70 -1.6 1,360,933 + MPMX26_01284 0.70 -2.9 1,360,933 + MPMX26_01284 0.70 -2.3 1,360,933 + MPMX26_01284 0.70 -2.8 1,360,939 + MPMX26_01284 0.71 -2.7 1,360,948 + MPMX26_01284 0.71 -2.5 1,360,954 + MPMX26_01284 0.71 -2.2 1,360,975 + MPMX26_01284 0.72 -2.7 1,361,000 + MPMX26_01284 0.73 -1.9 1,361,000 + MPMX26_01284 0.73 -0.5 1,361,000 + MPMX26_01284 0.73 -2.4 1,361,000 + MPMX26_01284 0.73 -2.9 1,361,000 + MPMX26_01284 0.73 -3.0 1,361,000 + MPMX26_01284 0.73 +0.4 1,361,000 + MPMX26_01284 0.73 -1.0 1,361,000 + MPMX26_01284 0.73 -2.3 1,361,000 + MPMX26_01284 0.73 -1.7 1,361,000 + MPMX26_01284 0.73 -2.5 1,361,000 + MPMX26_01284 0.73 -1.5 1,361,000 + MPMX26_01284 0.73 -1.4 1,361,000 + MPMX26_01284 0.73 -1.4 1,361,000 + MPMX26_01284 0.73 -1.8 1,361,042 + MPMX26_01284 0.75 -1.3 1,361,064 + MPMX26_01284 0.76 -1.7 1,361,068 + MPMX26_01284 0.76 -1.7 1,361,127 + MPMX26_01284 0.79 -1.8 1,361,190 + MPMX26_01284 0.82 +1.3 1,361,190 + MPMX26_01284 0.82 -1.7 1,361,190 + MPMX26_01284 0.82 -3.8 1,361,190 + MPMX26_01284 0.82 -2.5 1,361,190 + MPMX26_01284 0.82 -1.3 1,361,208 + MPMX26_01284 0.83 -1.7 1,361,229 + MPMX26_01284 0.83 -0.5 1,361,229 + MPMX26_01284 0.83 -0.4 1,361,246 + MPMX26_01284 0.84 -1.6 1,361,300 + MPMX26_01284 0.87 -0.7 1,361,316 + MPMX26_01284 0.87 -2.3 1,361,370 + MPMX26_01284 0.90 -2.8 1,361,370 + MPMX26_01284 0.90 -2.1 1,361,370 + MPMX26_01284 0.90 -0.1 1,361,370 + MPMX26_01284 0.90 -1.9 1,361,370 + MPMX26_01284 0.90 -0.7 1,361,370 + MPMX26_01284 0.90 -1.5 1,361,390 + +0.1 1,361,398 + -2.3 1,361,398 + -0.8 1,361,398 + -3.3 1,361,398 + -2.6 1,361,403 + -2.0 1,361,403 + -1.5 1,361,403 + -1.8 1,361,403 + +0.8 1,361,403 + -2.1 1,361,404 + -1.9 1,361,405 + -3.2 1,361,415 + -2.2 1,361,415 + -2.5 1,361,429 + -1.4 1,361,429 + -2.5 1,361,429 + -1.7 1,361,429 + -1.9 1,361,439 + -2.3 1,361,441 + -3.3 1,361,499 + -1.5 1,361,545 + -1.7 1,361,599 + -0.0 1,361,599 + +0.5 1,361,610 + -0.4 1,361,617 + +0.5 1,361,617 + +0.5 1,362,617 - +0.8 1,362,617 - +0.7 1,362,617 - +0.2 1,362,617 - -1.9 1,362,697 - -1.7 1,362,753 - MPMX26_01287 0.15 -0.9 1,362,758 - MPMX26_01287 0.16 -0.3 1,362,758 - MPMX26_01287 0.16 -1.8 1,362,758 - MPMX26_01287 0.16 -1.3 1,362,758 - MPMX26_01287 0.16 +0.4 1,362,758 - MPMX26_01287 0.16 +1.8 1,362,758 - MPMX26_01287 0.16 +0.1 1,362,781 - MPMX26_01287 0.18 -1.2 1,362,781 - MPMX26_01287 0.18 -1.2 1,362,781 - MPMX26_01287 0.18 -0.5 1,362,781 - MPMX26_01287 0.18 -1.1 1,362,789 - MPMX26_01287 0.19 +0.8 1,362,815 - MPMX26_01287 0.22 -1.3 1,362,837 - MPMX26_01287 0.25 -2.2 1,362,864 - MPMX26_01287 0.27 -0.2 1,362,874 - MPMX26_01287 0.29 -2.3 1,362,874 - MPMX26_01287 0.29 -0.5 1,362,882 - MPMX26_01287 0.29 -0.8 1,362,887 - MPMX26_01287 0.30 -0.6 1,362,918 - MPMX26_01287 0.33 +1.4 1,362,928 - MPMX26_01287 0.34 -1.1 1,362,928 - MPMX26_01287 0.34 -0.7 1,362,928 - MPMX26_01287 0.34 -1.4 1,362,936 - MPMX26_01287 0.35 -0.8 1,362,936 - MPMX26_01287 0.35 +0.4 1,362,978 - MPMX26_01287 0.40 -0.8 1,362,978 - MPMX26_01287 0.40 -0.8 1,362,978 - MPMX26_01287 0.40 -0.7
Or see this region's nucleotide sequence