Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00678

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00676 and MPMX26_00677 are separated by 1 nucleotidesMPMX26_00677 and MPMX26_00678 are separated by 65 nucleotidesMPMX26_00678 and MPMX26_00679 are separated by 475 nucleotides MPMX26_00676: MPMX26_00676 - Glutamate/aspartate import permease protein GltK, at 718,800 to 719,483 _00676 MPMX26_00677: MPMX26_00677 - Glutamate/aspartate import permease protein GltJ, at 719,485 to 720,228 _00677 MPMX26_00678: MPMX26_00678 - Glutamate/aspartate import solute-binding protein, at 720,294 to 721,256 _00678 MPMX26_00679: MPMX26_00679 - hypothetical protein, at 721,732 to 722,664 _00679 Position (kb) 720 721 722Strain fitness (log2 ratio) -2 -1 0 1 2at 719.354 kb on - strand, within MPMX26_00676at 719.360 kb on - strand, within MPMX26_00676at 719.418 kb on - strandat 719.441 kb on - strandat 719.480 kb on - strandat 719.524 kb on - strandat 719.524 kb on - strandat 719.638 kb on - strand, within MPMX26_00677at 719.708 kb on + strand, within MPMX26_00677at 719.769 kb on - strand, within MPMX26_00677at 719.769 kb on - strand, within MPMX26_00677at 719.796 kb on - strand, within MPMX26_00677at 719.811 kb on - strand, within MPMX26_00677at 719.811 kb on - strand, within MPMX26_00677at 719.842 kb on - strand, within MPMX26_00677at 719.844 kb on - strand, within MPMX26_00677at 719.869 kb on - strand, within MPMX26_00677at 719.885 kb on - strand, within MPMX26_00677at 719.977 kb on - strand, within MPMX26_00677at 720.058 kb on - strand, within MPMX26_00677at 720.058 kb on - strand, within MPMX26_00677at 720.058 kb on - strand, within MPMX26_00677at 720.094 kb on - strand, within MPMX26_00677at 720.096 kb on - strand, within MPMX26_00677at 720.096 kb on - strand, within MPMX26_00677at 720.096 kb on - strand, within MPMX26_00677at 720.115 kb on - strand, within MPMX26_00677at 720.115 kb on - strand, within MPMX26_00677at 720.142 kb on - strand, within MPMX26_00677at 720.156 kb on - strandat 720.156 kb on - strandat 720.186 kb on - strandat 720.204 kb on - strandat 720.204 kb on - strandat 720.204 kb on - strandat 720.204 kb on - strandat 720.209 kb on - strandat 720.307 kb on - strandat 720.314 kb on - strandat 720.324 kb on - strandat 720.434 kb on - strand, within MPMX26_00678at 720.434 kb on - strand, within MPMX26_00678at 720.448 kb on - strand, within MPMX26_00678at 720.486 kb on - strand, within MPMX26_00678at 720.486 kb on - strand, within MPMX26_00678at 720.486 kb on - strand, within MPMX26_00678at 720.496 kb on - strand, within MPMX26_00678at 720.496 kb on - strand, within MPMX26_00678at 720.503 kb on - strand, within MPMX26_00678at 720.503 kb on - strand, within MPMX26_00678at 720.503 kb on - strand, within MPMX26_00678at 720.503 kb on - strand, within MPMX26_00678at 720.503 kb on - strand, within MPMX26_00678at 720.548 kb on - strand, within MPMX26_00678at 720.561 kb on - strand, within MPMX26_00678at 720.561 kb on - strand, within MPMX26_00678at 720.644 kb on - strand, within MPMX26_00678at 720.731 kb on - strand, within MPMX26_00678at 720.791 kb on - strand, within MPMX26_00678at 720.791 kb on - strand, within MPMX26_00678at 720.791 kb on - strand, within MPMX26_00678at 720.796 kb on - strand, within MPMX26_00678at 720.849 kb on - strand, within MPMX26_00678at 720.857 kb on - strand, within MPMX26_00678at 720.857 kb on - strand, within MPMX26_00678at 720.875 kb on - strand, within MPMX26_00678at 720.875 kb on - strand, within MPMX26_00678at 720.981 kb on - strand, within MPMX26_00678at 721.001 kb on - strand, within MPMX26_00678at 721.008 kb on - strand, within MPMX26_00678at 721.029 kb on - strand, within MPMX26_00678at 721.072 kb on - strand, within MPMX26_00678at 721.072 kb on - strand, within MPMX26_00678at 721.073 kb on - strand, within MPMX26_00678at 721.078 kb on - strand, within MPMX26_00678at 721.078 kb on - strand, within MPMX26_00678at 721.086 kb on - strand, within MPMX26_00678at 721.086 kb on - strand, within MPMX26_00678at 721.086 kb on - strand, within MPMX26_00678at 721.086 kb on - strand, within MPMX26_00678at 721.086 kb on - strand, within MPMX26_00678at 721.105 kb on - strand, within MPMX26_00678at 721.105 kb on - strand, within MPMX26_00678at 721.115 kb on - strand, within MPMX26_00678at 721.115 kb on - strand, within MPMX26_00678at 721.143 kb on - strand, within MPMX26_00678at 721.153 kb on - strand, within MPMX26_00678at 721.163 kb on - strandat 721.194 kb on - strandat 721.199 kb on - strandat 721.201 kb on - strandat 721.216 kb on - strandat 721.229 kb on - strandat 721.234 kb on - strandat 721.234 kb on - strandat 721.234 kb on - strandat 721.235 kb on - strandat 721.285 kb on - strandat 721.963 kb on + strand, within MPMX26_00679at 721.965 kb on + strand, within MPMX26_00679at 721.993 kb on + strand, within MPMX26_00679at 721.993 kb on + strand, within MPMX26_00679at 722.233 kb on + strand, within MPMX26_00679

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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719,354 - MPMX26_00676 0.81 +0.1
719,360 - MPMX26_00676 0.82 +1.3
719,418 - +2.2
719,441 - +0.3
719,480 - +0.3
719,524 - +0.4
719,524 - -0.4
719,638 - MPMX26_00677 0.21 -0.2
719,708 + MPMX26_00677 0.30 -1.5
719,769 - MPMX26_00677 0.38 -1.1
719,769 - MPMX26_00677 0.38 +1.4
719,796 - MPMX26_00677 0.42 +2.6
719,811 - MPMX26_00677 0.44 -0.4
719,811 - MPMX26_00677 0.44 +1.2
719,842 - MPMX26_00677 0.48 +0.3
719,844 - MPMX26_00677 0.48 -0.4
719,869 - MPMX26_00677 0.52 +0.7
719,885 - MPMX26_00677 0.54 -0.3
719,977 - MPMX26_00677 0.66 +0.7
720,058 - MPMX26_00677 0.77 -0.9
720,058 - MPMX26_00677 0.77 -0.1
720,058 - MPMX26_00677 0.77 -1.0
720,094 - MPMX26_00677 0.82 -0.4
720,096 - MPMX26_00677 0.82 +0.8
720,096 - MPMX26_00677 0.82 -0.3
720,096 - MPMX26_00677 0.82 +0.2
720,115 - MPMX26_00677 0.85 -0.4
720,115 - MPMX26_00677 0.85 -0.5
720,142 - MPMX26_00677 0.88 -0.5
720,156 - -0.1
720,156 - +1.6
720,186 - +1.1
720,204 - -1.2
720,204 - -0.6
720,204 - -0.1
720,204 - -0.1
720,209 - +1.1
720,307 - -0.7
720,314 - -0.1
720,324 - +0.1
720,434 - MPMX26_00678 0.15 +0.5
720,434 - MPMX26_00678 0.15 +0.3
720,448 - MPMX26_00678 0.16 -0.3
720,486 - MPMX26_00678 0.20 -0.3
720,486 - MPMX26_00678 0.20 +0.1
720,486 - MPMX26_00678 0.20 +0.7
720,496 - MPMX26_00678 0.21 +0.4
720,496 - MPMX26_00678 0.21 +1.8
720,503 - MPMX26_00678 0.22 -0.2
720,503 - MPMX26_00678 0.22 +1.2
720,503 - MPMX26_00678 0.22 +0.1
720,503 - MPMX26_00678 0.22 -0.2
720,503 - MPMX26_00678 0.22 +1.6
720,548 - MPMX26_00678 0.26 -0.2
720,561 - MPMX26_00678 0.28 -1.0
720,561 - MPMX26_00678 0.28 +0.0
720,644 - MPMX26_00678 0.36 -0.5
720,731 - MPMX26_00678 0.45 -1.8
720,791 - MPMX26_00678 0.52 -0.5
720,791 - MPMX26_00678 0.52 -0.7
720,791 - MPMX26_00678 0.52 +0.1
720,796 - MPMX26_00678 0.52 +1.1
720,849 - MPMX26_00678 0.58 +0.6
720,857 - MPMX26_00678 0.58 -0.2
720,857 - MPMX26_00678 0.58 -0.5
720,875 - MPMX26_00678 0.60 -0.5
720,875 - MPMX26_00678 0.60 -0.4
720,981 - MPMX26_00678 0.71 +0.6
721,001 - MPMX26_00678 0.73 +0.0
721,008 - MPMX26_00678 0.74 -1.9
721,029 - MPMX26_00678 0.76 +0.0
721,072 - MPMX26_00678 0.81 +0.0
721,072 - MPMX26_00678 0.81 -1.1
721,073 - MPMX26_00678 0.81 +0.7
721,078 - MPMX26_00678 0.81 +0.1
721,078 - MPMX26_00678 0.81 -1.2
721,086 - MPMX26_00678 0.82 +0.1
721,086 - MPMX26_00678 0.82 -0.5
721,086 - MPMX26_00678 0.82 -0.3
721,086 - MPMX26_00678 0.82 +0.5
721,086 - MPMX26_00678 0.82 -0.5
721,105 - MPMX26_00678 0.84 -1.0
721,105 - MPMX26_00678 0.84 -0.6
721,115 - MPMX26_00678 0.85 -0.5
721,115 - MPMX26_00678 0.85 +0.4
721,143 - MPMX26_00678 0.88 +0.2
721,153 - MPMX26_00678 0.89 +0.2
721,163 - +0.9
721,194 - -1.6
721,199 - -0.5
721,201 - +2.0
721,216 - +1.1
721,229 - +0.5
721,234 - -0.6
721,234 - -0.7
721,234 - +0.1
721,235 - +0.1
721,285 - -0.5
721,963 + MPMX26_00679 0.25 +1.2
721,965 + MPMX26_00679 0.25 +1.4
721,993 + MPMX26_00679 0.28 -1.1
721,993 + MPMX26_00679 0.28 +0.1
722,233 + MPMX26_00679 0.54 +1.4

Or see this region's nucleotide sequence