Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00625 and MPMX26_00626 are separated by 557 nucleotides MPMX26_00626 and MPMX26_00627 are separated by 2 nucleotides MPMX26_00627 and MPMX26_00628 are separated by 29 nucleotides
MPMX26_00625: MPMX26_00625 - hypothetical protein, at 665,454 to 666,458
_00625
MPMX26_00626: MPMX26_00626 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B, at 667,016 to 667,669
_00626
MPMX26_00627: MPMX26_00627 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A, at 667,672 to 668,379
_00627
MPMX26_00628: MPMX26_00628 - 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase, at 668,409 to 669,314
_00628
Position (kb) 667
668 Strain fitness (log2 ratio) -1
0
1
2 at 666.026 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.069 kb on + strand, within MPMX26_00625 at 666.074 kb on + strand, within MPMX26_00625 at 666.074 kb on + strand, within MPMX26_00625 at 666.074 kb on + strand, within MPMX26_00625 at 666.117 kb on + strand, within MPMX26_00625 at 666.212 kb on + strand, within MPMX26_00625 at 666.231 kb on + strand, within MPMX26_00625 at 666.231 kb on + strand, within MPMX26_00625 at 666.254 kb on + strand, within MPMX26_00625 at 666.324 kb on + strand, within MPMX26_00625 at 666.378 kb on + strand at 666.472 kb on + strand at 666.547 kb on - strand at 666.547 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 666,026 + MPMX26_00625 0.57 +0.3 666,069 + MPMX26_00625 0.61 -0.2 666,069 + MPMX26_00625 0.61 -1.5 666,069 + MPMX26_00625 0.61 +1.3 666,069 + MPMX26_00625 0.61 +0.2 666,069 + MPMX26_00625 0.61 +0.9 666,069 + MPMX26_00625 0.61 +0.4 666,069 + MPMX26_00625 0.61 +0.3 666,069 + MPMX26_00625 0.61 -0.4 666,069 + MPMX26_00625 0.61 -0.0 666,074 + MPMX26_00625 0.62 +0.9 666,074 + MPMX26_00625 0.62 +0.5 666,074 + MPMX26_00625 0.62 -0.9 666,117 + MPMX26_00625 0.66 +0.2 666,212 + MPMX26_00625 0.75 +0.3 666,231 + MPMX26_00625 0.77 +0.7 666,231 + MPMX26_00625 0.77 -0.1 666,254 + MPMX26_00625 0.80 +0.2 666,324 + MPMX26_00625 0.87 +0.3 666,378 + +0.4 666,472 + +0.4 666,547 - +2.4 666,547 - -0.3
Or see this region's nucleotide sequence