Strain Fitness in Escherichia coli ECRC101 around MCAODC_21680

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
1,119,766	-	rssB	MCAODC_21675	0.21	-0.5
1,119,912	-	rssB	MCAODC_21675	0.35	+0.2
1,119,937	+	rssB	MCAODC_21675	0.38	+0.2
1,120,048	+	rssB	MCAODC_21675	0.49	+1.1
1,120,089	-	rssB	MCAODC_21675	0.53	+1.8
1,120,089	-	rssB	MCAODC_21675	0.53	-0.2
1,120,089	-	rssB	MCAODC_21675	0.53	+0.2
1,120,288	+	rssB	MCAODC_21675	0.72	+1.8
1,120,346	-	rssB	MCAODC_21675	0.78	-0.5
1,120,350	-	rssB	MCAODC_21675	0.79	+1.2
1,120,401	-	rssB	MCAODC_21675	0.84	-1.5
1,120,401	-	rssB	MCAODC_21675	0.84	+0.2
1,120,515	-				+2.8
1,120,597	-				-0.9
1,120,597	-				-0.9
1,120,608	-				-0.3
1,120,608	-				-2.1
1,120,608	-				-1.0
1,120,608	-				+2.5
1,120,638	-				-0.7
1,120,644	-				+1.2
1,120,674	+				-0.5
1,120,761	-	rssA	MCAODC_21680	0.11	-0.8
1,120,761	-	rssA	MCAODC_21680	0.11	-0.7
1,120,765	-	rssA	MCAODC_21680	0.11	+2.6
1,120,906	-	rssA	MCAODC_21680	0.26	-0.8
1,120,908	-	rssA	MCAODC_21680	0.26	+0.3
1,120,982	+	rssA	MCAODC_21680	0.34	+0.8
1,120,982	+	rssA	MCAODC_21680	0.34	-1.5
1,121,046	-	rssA	MCAODC_21680	0.41	+1.8
1,121,075	+	rssA	MCAODC_21680	0.44	+0.6
1,121,140	-	rssA	MCAODC_21680	0.51	+0.6
1,121,199	+	rssA	MCAODC_21680	0.57	+0.2
1,121,214	-	rssA	MCAODC_21680	0.59	-0.2
1,121,218	-	rssA	MCAODC_21680	0.59	+1.2
1,121,218	-	rssA	MCAODC_21680	0.59	+0.5
1,121,278	-	rssA	MCAODC_21680	0.66	-0.8
1,121,353	-	rssA	MCAODC_21680	0.73	+1.2
1,121,366	-	rssA	MCAODC_21680	0.75	+0.2
1,121,416	+	rssA	MCAODC_21680	0.80	-1.2
1,121,417	-	rssA	MCAODC_21680	0.80	-0.1
1,121,417	-	rssA	MCAODC_21680	0.80	+2.5
1,121,493	-	rssA	MCAODC_21680	0.88	-1.4
1,121,625	+				-0.2
1,121,626	-				+0.3
1,121,632	-				+0.7
1,121,715	+				-0.5
1,121,715	+				+2.8
1,121,720	+				+0.9
1,121,720	+				-0.3
1,121,720	+				+1.2
1,121,721	-				+0.5
1,121,721	-				-1.4
1,121,721	-				+0.6
1,121,721	-				-1.2
1,121,721	-				+0.4
1,121,721	-				-0.2
1,121,721	-				+2.8
1,121,734	+	ychJ	MCAODC_21685	0.12	+0.8
1,121,735	-	ychJ	MCAODC_21685	0.13	-1.0
1,121,861	+	ychJ	MCAODC_21685	0.40	+0.3
1,121,862	-	ychJ	MCAODC_21685	0.40	+1.1
1,122,002	+	ychJ	MCAODC_21685	0.71	-1.2
1,122,043	+	ychJ	MCAODC_21685	0.80	-0.2
1,122,046	+	ychJ	MCAODC_21685	0.80	-0.6
1,122,046	+	ychJ	MCAODC_21685	0.80	-0.3
1,122,046	+	ychJ	MCAODC_21685	0.80	-1.4
1,122,048	+	ychJ	MCAODC_21685	0.81	+1.2
1,122,048	+	ychJ	MCAODC_21685	0.81	-1.2
1,122,048	+	ychJ	MCAODC_21685	0.81	+2.8
1,122,058	-	ychJ	MCAODC_21685	0.83	-0.8
1,122,218	-				-0.1
1,122,250	+				+0.8
1,122,251	-				-0.4
1,122,254	-				+0.8
1,122,254	-				+0.2
1,122,266	+				-1.1
1,122,279	+	purU	MCAODC_21690	0.11	-0.7
1,122,280	-	purU	MCAODC_21690	0.11	+0.2
1,122,284	-	purU	MCAODC_21690	0.12	+0.8
1,122,358	+	purU	MCAODC_21690	0.21	-1.2
1,122,503	+	purU	MCAODC_21690	0.38	+0.2
1,122,504	-	purU	MCAODC_21690	0.38	+0.2
1,122,555	+	purU	MCAODC_21690	0.44	-1.0
1,122,581	-	purU	MCAODC_21690	0.47	-0.2
1,122,581	-	purU	MCAODC_21690	0.47	-0.5
1,122,582	+	purU	MCAODC_21690	0.47	+0.1