Strain Fitness in Escherichia coli ECRC101 around MCAODC_09850

Experiment: TP9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP9
1,963,869	-	tkt	MCAODC_09845	0.66	+1.8
1,964,017	+	tkt	MCAODC_09845	0.74	+0.2
1,964,171	+	tkt	MCAODC_09845	0.81	+1.8
1,964,171	+	tkt	MCAODC_09845	0.81	+0.8
1,964,414	+				+0.2
1,964,415	-				+0.2
1,964,540	+				+0.4
1,964,540	+				-0.4
1,964,545	-				-0.2
1,964,587	-				-0.1
1,964,673	-				+0.4
1,964,709	+				-0.1
1,964,965	-	cmtB	MCAODC_09850	0.25	-0.1
1,965,025	-	cmtB	MCAODC_09850	0.38	+0.6
1,965,302	-				-0.2
1,965,323	+				-0.2
1,965,505	+	cmtA	MCAODC_09855	0.13	-0.6
1,965,505	+	cmtA	MCAODC_09855	0.13	+1.5
1,965,527	+	cmtA	MCAODC_09855	0.14	+0.5
1,965,581	+	cmtA	MCAODC_09855	0.18	-0.3
1,965,582	-	cmtA	MCAODC_09855	0.18	-0.0
1,965,584	+	cmtA	MCAODC_09855	0.19	-0.5
1,965,584	+	cmtA	MCAODC_09855	0.19	-1.4
1,965,585	-	cmtA	MCAODC_09855	0.19	+0.4
1,965,585	-	cmtA	MCAODC_09855	0.19	+0.2
1,965,585	-	cmtA	MCAODC_09855	0.19	-1.2
1,965,661	+	cmtA	MCAODC_09855	0.24	-0.7
1,965,666	+	cmtA	MCAODC_09855	0.24	+0.8
1,965,666	+	cmtA	MCAODC_09855	0.24	-1.2
1,965,666	+	cmtA	MCAODC_09855	0.24	-0.6
1,965,666	+	cmtA	MCAODC_09855	0.24	+0.7
1,965,666	+	cmtA	MCAODC_09855	0.24	+0.3
1,965,667	-	cmtA	MCAODC_09855	0.24	-0.2
1,965,733	+	cmtA	MCAODC_09855	0.29	+0.4
1,965,734	-	cmtA	MCAODC_09855	0.29	+0.0
1,965,734	-	cmtA	MCAODC_09855	0.29	-0.2
1,965,821	+	cmtA	MCAODC_09855	0.36	+1.8
1,965,835	+	cmtA	MCAODC_09855	0.37	-0.5
1,965,836	-	cmtA	MCAODC_09855	0.37	-0.1
1,965,900	-	cmtA	MCAODC_09855	0.41	+0.0
1,965,900	-	cmtA	MCAODC_09855	0.41	-0.4
1,965,921	+	cmtA	MCAODC_09855	0.43	+0.8
1,965,922	-	cmtA	MCAODC_09855	0.43	-1.0
1,965,922	-	cmtA	MCAODC_09855	0.43	+0.4
1,965,960	-	cmtA	MCAODC_09855	0.46	+0.6
1,965,960	-	cmtA	MCAODC_09855	0.46	+2.4
1,965,974	+	cmtA	MCAODC_09855	0.47	+0.9
1,965,975	-	cmtA	MCAODC_09855	0.47	-0.3
1,965,975	-	cmtA	MCAODC_09855	0.47	+0.1
1,966,022	+	cmtA	MCAODC_09855	0.50	+1.2
1,966,023	-	cmtA	MCAODC_09855	0.50	+0.2
1,966,034	+	cmtA	MCAODC_09855	0.51	+0.6
1,966,034	+	cmtA	MCAODC_09855	0.51	+0.2
1,966,105	-	cmtA	MCAODC_09855	0.56	-0.0
1,966,105	-	cmtA	MCAODC_09855	0.56	+1.2
1,966,105	-	cmtA	MCAODC_09855	0.56	-1.2
1,966,113	+	cmtA	MCAODC_09855	0.57	-0.4
1,966,136	+	cmtA	MCAODC_09855	0.58	-1.2
1,966,137	-	cmtA	MCAODC_09855	0.58	-3.2
1,966,139	+	cmtA	MCAODC_09855	0.58	+1.2
1,966,139	+	cmtA	MCAODC_09855	0.58	-0.2
1,966,140	-	cmtA	MCAODC_09855	0.59	+1.0
1,966,140	-	cmtA	MCAODC_09855	0.59	-0.1
1,966,160	+	cmtA	MCAODC_09855	0.60	-0.8
1,966,160	+	cmtA	MCAODC_09855	0.60	+0.6
1,966,186	+	cmtA	MCAODC_09855	0.62	-0.6
1,966,227	-	cmtA	MCAODC_09855	0.65	+0.7
1,966,287	-	cmtA	MCAODC_09855	0.69	-0.6
1,966,292	-	cmtA	MCAODC_09855	0.69	-0.3
1,966,295	+	cmtA	MCAODC_09855	0.70	+0.2
1,966,295	+	cmtA	MCAODC_09855	0.70	-0.2
1,966,296	-	cmtA	MCAODC_09855	0.70	-1.0
1,966,296	-	cmtA	MCAODC_09855	0.70	-0.8