Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF852

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
566,294	+				+0.6
566,295	-				-0.4
566,328	+				+0.6
566,329	-				+0.8
566,329	-				+0.2
566,366	+				-0.8
566,366	+				-1.2
566,367	-				-0.6
566,386	+				-0.8
566,386	+				+0.4
566,565	+				+0.7
566,565	+				+0.7
566,565	+				+0.4
566,565	+				-1.3
566,565	+				-0.5
566,565	+				+0.4
566,566	-				-0.2
566,566	-				+0.2
566,566	-				+0.9
566,584	+				-1.4
566,585	-				-1.1
566,595	+				+0.2
566,595	+				-1.8
566,595	+				-0.6
566,595	+				+0.2
566,596	-				-0.5
566,596	-				+0.5
566,596	-				-0.3
566,693	+				-0.0
566,709	+				+0.1
566,710	-				-0.0
566,710	-				-0.1
566,710	-				+0.5
566,710	-				-1.8
566,713	+				+1.1
566,713	+				-0.8
566,714	-				+1.0
566,740	+				+1.4
566,740	+				+0.2
566,741	-				-0.3
566,741	-				+1.5
566,741	-				-0.2
566,741	-				-1.0
566,916	+				+0.8
566,916	+				+0.3
566,916	+				-0.2
566,916	+				-0.3
566,943	+				+0.2
566,943	+				-0.3
566,943	+				+0.2
566,944	-				-0.8
566,944	-				+0.4
566,944	-				+0.8
566,944	-				+0.2
566,944	-				-0.7
566,979	+				-0.3
566,979	+				-0.0
566,979	+				+1.1
566,979	+				+0.3
566,979	+				+1.0
566,979	+				+0.6
566,979	+				-1.4
566,980	-				+0.2
566,980	-				-0.3
567,094	+				-0.1
567,095	-				-0.7
567,095	-				-0.3
567,095	-				+0.4
567,153	+				-1.6
567,153	+				-0.1
567,154	-				+0.2
567,154	-				+0.2
567,154	-				+0.9
567,154	-				-0.7
567,154	-				-2.2
567,154	-				-0.8
567,208	-				-0.5
567,208	-				-2.3
567,235	-				-0.3
567,263	+				-0.6
567,263	+				+0.3
567,264	-				+0.5
567,264	-				-2.0
567,264	-				+0.1
567,264	-				-0.0
567,300	+				-2.0
567,300	+				-0.2
567,458	+		GFF852	0.30	-0.3
567,540	+		GFF852	0.43	+0.4
567,540	+		GFF852	0.43	+2.1
567,540	+		GFF852	0.43	-0.0
567,540	+		GFF852	0.43	-0.5
567,540	+		GFF852	0.43	-0.6
567,541	-		GFF852	0.43	-2.4
567,693	-		GFF852	0.67	+0.3
567,706	-		GFF852	0.69	+0.2
567,754	-		GFF852	0.77	-2.6
567,754	-		GFF852	0.77	-2.0
567,835	+		GFF852	0.89	-1.0
567,836	-		GFF852	0.89	+1.2
567,850	-				-1.0
568,011	-		GFF853	0.13	-0.8
568,011	-		GFF853	0.13	-0.7
568,079	+		GFF853	0.35	+0.6
568,099	+		GFF853	0.41	+0.2
568,124	+		GFF853	0.49	-0.3
568,125	-		GFF853	0.49	+0.3
568,125	-		GFF853	0.49	-0.7
568,236	+		GFF853	0.83	+0.4
568,237	-		GFF853	0.84	-1.4
568,318	+				-0.5
568,326	+				-1.3
568,381	+				-1.2
568,381	+				+0.5
568,382	-				+0.4
568,382	-				-0.2
568,405	+				-0.2
568,405	+				-1.2
568,406	-				-0.1
568,425	+				-0.1
568,425	+				+0.1
568,425	+				+0.2
568,426	-				+0.2
568,426	-				-2.1
568,426	-				+0.2
568,426	-				+0.7
568,429	+				-0.9
568,429	+				-0.7
568,430	-				+0.0
568,430	-				-1.0
568,519	+				+0.9
568,519	+				+1.1
568,615	-				+0.3
568,615	-				+0.3
568,615	-				-0.9
568,651	+				+0.1
568,651	+				-0.8
568,652	-				+0.2
568,702	+				-0.8
568,709	+				+1.0
568,709	+				-1.0
568,710	-				+0.1
568,710	-				-0.1
568,710	-				+0.2
568,710	-				+0.4
568,713	+				+0.1
568,713	+				-0.3
568,773	+				+0.2
568,773	+				+0.1
568,774	-				-1.1
568,774	-				-0.0
568,810	+				+0.9
568,810	+				-0.1
568,876	+				-1.8
568,876	+				-1.0