Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF832

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
529,562	+				+0.3
529,562	+				+0.1
529,563	-				-0.2
529,563	-				+1.1
529,563	-				-1.7
529,599	+				-0.5
529,600	-				+0.3
529,608	+				-1.6
529,608	+				+0.5
529,608	+				-0.7
529,609	-				-0.1
529,609	-				+0.7
529,609	-				+0.2
529,642	+				-0.0
529,642	+				+0.0
529,642	+				+0.2
529,642	+				-0.4
529,643	-				-0.2
529,661	-				-0.2
529,685	+				+0.0
529,686	-				+0.4
529,686	-				-2.3
529,717	+				+0.8
529,717	+				-2.4
529,825	-				-1.9
529,914	+				-1.4
529,965	+				+0.2
529,965	+				-0.2
529,965	+				+0.1
529,966	-				-2.4
529,966	-				+0.2
529,966	-				-0.3
529,969	+				-0.5
529,969	+				-1.2
529,970	-				+0.3
530,016	-				-0.4
530,016	-				+0.4
530,016	-				-0.3
530,016	-				+0.1
530,016	-				-1.7
530,039	+				-0.5
530,040	-				+1.2
530,235	+				-1.6
530,235	+				+0.6
530,235	+				-1.6
530,236	-				+0.6
530,295	+				-1.4
530,295	+				+0.2
530,295	+				-0.6
530,295	+				+0.3
530,295	+				-0.5
530,296	-				+0.0
530,296	-				-0.9
530,383	-				-0.4
530,427	+				-2.6
530,427	+				-1.1
530,428	-				-0.6
530,428	-				+0.8
530,435	+				-0.7
530,436	-				-0.3
530,444	+				-0.8
530,445	-				+0.4
530,453	-				+1.7
530,453	-				+0.8
530,453	-				+0.5
530,671	-				+1.4
530,766	-		GFF832	0.17	+0.3
530,812	-		GFF832	0.21	-0.6
531,000	+		GFF832	0.36	-0.2
531,001	-		GFF832	0.36	-0.5
531,013	+		GFF832	0.37	+0.8
531,013	+		GFF832	0.37	-1.4
531,013	+		GFF832	0.37	+0.3
531,013	+		GFF832	0.37	+1.0
531,014	-		GFF832	0.37	+1.1
531,214	+		GFF832	0.53	-0.1
531,214	+		GFF832	0.53	-1.6
531,215	-		GFF832	0.53	-1.4
531,215	-		GFF832	0.53	+0.2
531,259	+		GFF832	0.56	-1.2
531,259	+		GFF832	0.56	-0.1
531,259	+		GFF832	0.56	-0.0
531,260	-		GFF832	0.56	-0.8
531,260	-		GFF832	0.56	+0.4
531,299	-		GFF832	0.59	+0.1
531,616	+		GFF832	0.85	-0.5
531,630	+		GFF832	0.86	+0.7
531,635	+		GFF832	0.86	+0.5
531,635	+		GFF832	0.86	+0.3
531,635	+		GFF832	0.86	-0.8
531,635	+		GFF832	0.86	-0.6
531,635	+		GFF832	0.86	+0.1
531,635	+		GFF832	0.86	+1.1
531,636	-		GFF832	0.86	+0.1
531,687	+				+0.0
531,767	+				+1.0
531,767	+				-0.2
531,767	+				-0.4
531,768	-				-2.1
531,806	+				+1.1
531,806	+				+0.2
531,807	-				-0.0
531,807	-				-0.4
531,807	-				-0.6
531,855	+				+0.8
531,855	+				+1.4
531,858	+				-1.9
531,859	-				+0.3
531,986	-		GFF833	0.68	+0.2
531,986	-		GFF833	0.68	-0.5
531,986	-		GFF833	0.68	+0.5
532,396	-				-1.2
532,539	+				+0.5
532,686	+				+1.3
532,686	+				-1.6
532,686	+				+0.4
532,686	+				+1.2
532,687	-				-0.3
532,780	+				-0.9
532,780	+				+0.2
532,780	+				+1.0
532,780	+				-2.3
532,780	+				-2.0
532,781	-				-1.0
532,796	+				+1.3
532,796	+				-0.6
532,796	+				-0.8
532,797	-				-3.1