Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF730

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
409,114	+		GFF729	0.66	+1.5
409,115	-		GFF729	0.66	-0.2
409,430	-				-0.5
409,433	+				-0.5
409,435	+				-0.2
409,436	-				-0.3
409,767	+		GFF730	0.33	-2.3
409,767	+		GFF730	0.33	+0.3
409,767	+		GFF730	0.33	+0.1
409,768	-		GFF730	0.33	-0.6
409,768	-		GFF730	0.33	-0.3
409,768	-		GFF730	0.33	-0.4
409,932	+		GFF730	0.86	-0.4
409,933	-		GFF730	0.86	-0.0
410,077	+				+0.2
410,078	-				+1.7
410,078	-				-0.2
410,200	+		GFF731	0.22	-0.9
410,200	+		GFF731	0.22	-0.4
410,200	+		GFF731	0.22	-1.6
410,201	-		GFF731	0.22	+1.4
410,201	-		GFF731	0.22	+1.6
410,491	+		GFF731	0.51	-0.9
410,492	-		GFF731	0.51	-0.9
410,492	-		GFF731	0.51	+0.3
410,498	-		GFF731	0.52	+0.5
410,790	+		GFF731	0.81	-0.9
410,791	-		GFF731	0.82	-1.4