Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5818

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
12,023	-				-0.9
12,121	-				+0.1
12,433	+		GFF5817	0.30	-0.1
12,433	+		GFF5817	0.30	+0.0
12,433	+		GFF5817	0.30	+0.3
12,434	-		GFF5817	0.30	+0.4
12,434	-		GFF5817	0.30	+0.8
12,596	-		GFF5817	0.53	-0.6
12,596	-		GFF5817	0.53	+0.3
12,868	+				+0.8
12,869	-				+0.3
12,869	-				-2.7
12,901	+				-0.3
12,901	+				-0.3
13,222	-		GFF5818	0.76	+0.0
13,222	-		GFF5818	0.76	+0.9
13,222	-		GFF5818	0.76	+0.6
13,271	-				-0.1
13,416	-				-3.3
13,416	-				+0.9
13,420	-				+0.2
13,421	+				-0.2
13,539	-		GFF5819	0.15	-0.1
14,199	-		GFF5819	0.71	-0.4
14,199	-		GFF5819	0.71	-1.9