Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5403

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,408,293	+		GFF5402	0.22	+0.5
2,408,646	+		GFF5402	0.53	+0.4
2,408,743	+		GFF5402	0.62	+0.2
2,408,744	-		GFF5402	0.62	-0.2
2,409,108	-				+1.1
2,409,250	+		GFF5403	0.86	+1.5
2,409,250	+		GFF5403	0.86	+0.4
2,409,250	+		GFF5403	0.86	+0.1
2,409,250	+		GFF5403	0.86	+0.1
2,409,251	-		GFF5403	0.87	+0.2
2,409,251	-		GFF5403	0.87	+0.1
2,409,251	-		GFF5403	0.87	-0.6