Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5072

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,086,445	+		GFF5071	0.11	-1.3
2,086,446	-		GFF5071	0.11	-2.2
2,086,446	-		GFF5071	0.11	+0.5
2,086,446	-		GFF5071	0.11	-0.3
2,086,682	+		GFF5071	0.35	+1.2
2,086,685	+		GFF5071	0.35	-0.2
2,086,985	+		GFF5071	0.65	+0.4
2,087,025	-		GFF5071	0.69	-1.7
2,087,064	-		GFF5071	0.73	-0.2
2,087,102	+		GFF5071	0.76	+0.2
2,087,102	+		GFF5071	0.76	+0.9
2,087,103	-		GFF5071	0.77	+1.0
2,087,103	-		GFF5071	0.77	-0.2
2,087,301	-				+0.3
2,087,301	-				-0.6
2,087,301	-				-0.1
2,087,575	-		GFF5072	0.26	+0.4
2,087,575	-		GFF5072	0.26	+0.9
2,088,536	+		GFF5073	0.35	-1.3
2,088,537	-		GFF5073	0.35	+1.4
2,088,800	+		GFF5073	0.65	-1.6
2,088,821	+		GFF5073	0.67	-0.8
2,088,821	+		GFF5073	0.67	+0.4
2,088,822	-		GFF5073	0.67	-0.6
2,088,822	-		GFF5073	0.67	-0.1
2,088,962	+		GFF5073	0.83	+0.1
2,088,962	+		GFF5073	0.83	+0.6
2,088,962	+		GFF5073	0.83	-1.3
2,088,963	-		GFF5073	0.83	-1.4