Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5019

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
2,033,025	-				-0.6
2,033,033	-				-1.2
2,033,046	+				+0.4
2,033,047	-				+0.8
2,033,052	+				-2.1
2,033,052	+				+0.4
2,033,053	-				+0.0
2,033,056	-				+0.8
2,033,061	-				+0.6
2,033,110	-				+0.5
2,033,110	-				+0.1
2,033,175	+				+0.3
2,033,856	+		GFF5018	0.90	+0.0
2,033,857	-		GFF5018	0.90	+0.5
2,033,857	-		GFF5018	0.90	+0.4
2,033,857	-		GFF5018	0.90	+0.2
2,033,858	-				+0.9
2,033,865	+				-2.5
2,033,866	-				+0.0
2,034,221	+		GFF5019	0.22	+0.4
2,034,221	+		GFF5019	0.22	+1.1
2,034,222	-		GFF5019	0.22	-1.4
2,034,426	-		GFF5019	0.38	-2.5
2,034,590	+		GFF5019	0.51	+0.2
2,034,591	-		GFF5019	0.51	+0.4
2,034,999	-		GFF5019	0.83	+0.5
2,035,294	+				+0.2
2,035,295	-				-0.1
2,035,678	+		GFF5020	0.42	+0.6
2,035,678	+		GFF5020	0.42	+0.2
2,035,679	-		GFF5020	0.42	-2.9
2,035,679	-		GFF5020	0.42	+0.9
2,035,679	-		GFF5020	0.42	-0.4
2,035,679	-		GFF5020	0.42	-0.6