Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4682

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
1,632,165	+		GFF4681	0.64	-0.8
1,632,166	-		GFF4681	0.65	-0.5
1,632,184	+		GFF4681	0.67	-1.9
1,632,184	+		GFF4681	0.67	-0.4
1,632,185	-		GFF4681	0.67	-1.6
1,632,185	-		GFF4681	0.67	+0.1
1,632,223	+		GFF4681	0.72	-1.0
1,632,223	+		GFF4681	0.72	-0.3
1,632,224	-		GFF4681	0.72	-0.9
1,632,224	-		GFF4681	0.72	-2.3
1,632,224	-		GFF4681	0.72	-0.7
1,632,224	-		GFF4681	0.72	-0.9
1,632,298	+		GFF4681	0.82	-0.9
1,632,298	+		GFF4681	0.82	-1.5
1,632,298	+		GFF4681	0.82	+0.3
1,632,298	+		GFF4681	0.82	-0.3
1,632,298	+		GFF4681	0.82	+0.3
1,632,298	+		GFF4681	0.82	-1.0
1,632,298	+		GFF4681	0.82	+0.6
1,632,298	+		GFF4681	0.82	-0.1
1,632,298	+		GFF4681	0.82	-0.3
1,632,298	+		GFF4681	0.82	-1.3
1,632,298	+		GFF4681	0.82	+0.0
1,632,299	-		GFF4681	0.82	-0.5
1,632,299	-		GFF4681	0.82	-0.2
1,632,299	-		GFF4681	0.82	-0.9
1,632,299	-		GFF4681	0.82	-0.4
1,632,299	-		GFF4681	0.82	+0.7
1,632,299	-		GFF4681	0.82	+0.1
1,632,299	-		GFF4681	0.82	+1.2
1,632,299	-		GFF4681	0.82	-0.4
1,632,299	-		GFF4681	0.82	-0.2
1,632,473	-				-2.2
1,632,690	-		GFF4682	0.12	-0.0
1,632,716	+		GFF4682	0.15	-2.3
1,632,717	-		GFF4682	0.15	+0.2
1,632,717	-		GFF4682	0.15	-1.0
1,632,953	+		GFF4682	0.39	-1.9
1,632,954	-		GFF4682	0.39	+0.1
1,632,954	-		GFF4682	0.39	-0.9
1,632,954	-		GFF4682	0.39	-0.3
1,632,954	-		GFF4682	0.39	-0.3
1,632,954	-		GFF4682	0.39	-0.8
1,632,954	-		GFF4682	0.39	+1.6
1,633,125	-		GFF4682	0.57	+0.6
1,633,125	-		GFF4682	0.57	+0.2
1,633,337	+		GFF4682	0.78	+0.5
1,633,337	+		GFF4682	0.78	+0.3
1,633,338	-		GFF4682	0.78	-0.7
1,633,637	-				+0.4
1,633,859	-		GFF4683	0.13	-0.4
1,633,859	-		GFF4683	0.13	-0.1
1,633,954	+		GFF4683	0.17	-2.8
1,634,029	+		GFF4683	0.20	+0.3
1,634,029	+		GFF4683	0.20	-0.5
1,634,029	+		GFF4683	0.20	-1.7
1,634,030	-		GFF4683	0.20	-0.9
1,634,032	+		GFF4683	0.21	+0.7
1,634,089	+		GFF4683	0.23	+0.5
1,634,320	+		GFF4683	0.33	-1.8