Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4094

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
1,006,117	-		GFF4095	0.17	-1.3
1,006,368	-				+0.2
1,006,390	+				+0.5
1,006,391	-				-0.7
1,006,414	+				+1.3
1,006,415	-				+0.8
1,006,415	-				-0.5
1,006,415	-				-0.2
1,006,475	-		GFF4096	0.11	+1.9
1,006,555	+		GFF4096	0.24	-1.2
1,006,555	+		GFF4096	0.24	+0.2
1,006,555	+		GFF4096	0.24	-0.4
1,006,945	+		GFF4096	0.87	-0.1
1,007,045	+				-0.9
1,007,048	+				-1.1
1,007,048	+				+0.7
1,007,048	+				+1.1
1,007,049	-				+0.0
1,007,049	-				-0.2
1,007,049	-				+0.5