Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3054

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
132,420	+		GFF3053	0.28	-0.1
132,421	-		GFF3053	0.28	-0.2
133,510	+		GFF3054	0.45	-0.2
133,613	-		GFF3054	0.57	-0.0
133,943	-				-3.0
133,962	+				+2.0
134,433	+		GFF3055	0.40	-1.0
134,529	+		GFF3055	0.48	-0.4
134,529	+		GFF3055	0.48	+0.6
134,530	-		GFF3055	0.48	+0.8
134,530	-		GFF3055	0.48	+0.2
134,530	-		GFF3055	0.48	+0.2
134,530	-		GFF3055	0.48	-0.2
134,784	+		GFF3055	0.69	+1.6