Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2466

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
50,098	+		GFF2466	0.42	-0.9
50,098	+		GFF2466	0.42	-0.1
50,098	+		GFF2466	0.42	-0.1
50,098	+		GFF2466	0.42	+0.5
50,098	+		GFF2466	0.42	+0.7
50,098	+		GFF2466	0.42	-1.6
50,099	-		GFF2466	0.42	-2.6
50,099	-		GFF2466	0.42	+0.3
50,099	-		GFF2466	0.42	-0.4
50,221	+		GFF2466	0.58	+0.9
50,255	-		GFF2466	0.62	+0.8
50,384	+		GFF2466	0.79	-0.7
50,384	+		GFF2466	0.79	-0.9
50,512	+				-0.3
50,512	+				-1.1
50,512	+				-0.3
50,513	-				-2.9
50,513	-				-1.8
50,513	-				-0.3
50,513	-				+0.5
50,513	-				+0.2
50,610	+				-0.6
50,610	+				-0.3
50,611	-				-0.3
51,150	-				-1.0
51,150	-				-0.3
51,217	-				-1.3
51,217	-				-0.5
51,232	-		GFF2468	0.13	-0.8
51,232	-		GFF2468	0.13	+0.8
51,232	-		GFF2468	0.13	-0.1
51,232	-		GFF2468	0.13	+0.0
51,232	-		GFF2468	0.13	+0.6
51,234	+		GFF2468	0.13	-2.5
51,234	+		GFF2468	0.13	-1.3
51,234	+		GFF2468	0.13	-2.2
51,235	-		GFF2468	0.14	-1.0
51,235	-		GFF2468	0.14	-0.6
51,235	-		GFF2468	0.14	-0.8
51,235	-		GFF2468	0.14	-0.6
51,235	-		GFF2468	0.14	-0.3
51,321	+		GFF2468	0.38	+0.3
51,321	+		GFF2468	0.38	-2.7
51,322	-		GFF2468	0.39	-0.2
51,322	-		GFF2468	0.39	-0.9
51,322	-		GFF2468	0.39	-2.0
51,322	-		GFF2468	0.39	-1.7
51,331	-		GFF2468	0.41	-0.3
51,331	-		GFF2468	0.41	-0.8
51,331	-		GFF2468	0.41	+0.6
51,334	-		GFF2468	0.42	+1.7
51,397	-		GFF2468	0.60	-1.3
51,537	-				-1.1