Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF198

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
211,327	-		GFF197	0.59	+0.3
211,378	-		GFF197	0.64	+0.8
211,578	+		GFF197	0.85	+0.8
211,579	-		GFF197	0.85	-1.7
211,579	-		GFF197	0.85	+0.1
211,847	-				+0.8
212,036	-		GFF198	0.26	-0.4
212,036	-		GFF198	0.26	+1.5
212,078	-		GFF198	0.30	-0.3
212,078	-		GFF198	0.30	-0.3
212,252	-		GFF198	0.47	-0.2
212,255	-		GFF198	0.47	-0.6
212,318	-		GFF198	0.54	+0.6
212,948	+		GFF199	0.12	+0.3
212,948	+		GFF199	0.12	+1.0
212,949	-		GFF199	0.12	+0.1
212,949	-		GFF199	0.12	+1.4