Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1900

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
764,028	-		GFF1899	0.18	+0.0
764,028	-		GFF1899	0.18	-0.0
764,207	+		GFF1899	0.35	-0.5
764,744	+		GFF1899	0.86	+2.2
764,744	+		GFF1899	0.86	-1.4
764,744	+		GFF1899	0.86	+0.0
764,745	-		GFF1899	0.86	+2.3
764,924	+				+1.0
764,924	+				+0.3
766,448	-		GFF1901	0.48	+0.8
766,481	-		GFF1901	0.52	+0.3
766,481	-		GFF1901	0.52	+0.2
766,768	+		GFF1901	0.79	-0.6
766,769	-		GFF1901	0.79	-0.7
766,769	-		GFF1901	0.79	-0.5
766,769	-		GFF1901	0.79	-1.3