Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1492

Experiment: Ying_Nucleobase14 rep C; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 1
340,309	+		GFF1491	0.19	+0.2
340,447	+		GFF1491	0.32	-0.2
340,495	+		GFF1491	0.37	+0.2
340,496	-		GFF1491	0.37	+0.7
340,568	+		GFF1491	0.44	-0.7
340,568	+		GFF1491	0.44	-1.3
340,569	-		GFF1491	0.44	+0.3
340,569	-		GFF1491	0.44	+0.3
340,570	+		GFF1491	0.44	+0.1
341,328	+		GFF1492	0.21	+0.0
341,454	+		GFF1492	0.37	+0.5
341,919	+				+0.6
342,131	+		GFF1493	0.16	-0.3
342,302	+		GFF1493	0.32	-0.9
342,434	+		GFF1493	0.44	-0.3
342,434	+		GFF1493	0.44	-1.6
342,434	+		GFF1493	0.44	+0.4
342,435	-		GFF1493	0.44	-1.1
342,435	-		GFF1493	0.44	+0.7