Strain Fitness in Escherichia fergusonii Becca around EFB2_04642

Experiment: BHIS no phage control with 14 member community

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEFB2_04640 and EFB2_04641 are separated by 195 nucleotidesEFB2_04641 and EFB2_04642 are separated by 86 nucleotidesEFB2_04642 and EFB2_04643 are separated by 375 nucleotides EFB2_04640: EFB2_04640 - 23S ribosomal RNA, at 4,876,033 to 4,878,933 _04640 EFB2_04641: EFB2_04641 - tRNA-Glu, at 4,879,129 to 4,879,204 _04641 EFB2_04642: EFB2_04642 - 16S ribosomal RNA, at 4,879,291 to 4,880,828 _04642 EFB2_04643: EFB2_04643 - Glutamate racemase, at 4,881,204 to 4,882,061 _04643 Position (kb) 4879 4880 4881Strain fitness (log2 ratio) -1 0 1at 4881.173 kb on + strandat 4881.210 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction BHIS no phage control with 14 member community
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4,881,173 + +0.2
4,881,210 + -0.3

Or see this region's nucleotide sequence