Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01662

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01661 and BACOVA_01662 are separated by 177 nucleotidesBACOVA_01662 and BACOVA_01663 are separated by 91 nucleotides BACOVA_01661: BACOVA_01661 - oxidoreductase, NAD-binding domain protein, at 70,145 to 71,131 _01661 BACOVA_01662: BACOVA_01662 - hypothetical protein, at 71,309 to 71,497 _01662 BACOVA_01663: BACOVA_01663 - hypothetical protein, at 71,589 to 72,812 _01663 Position (kb) 71 72Strain fitness (log2 ratio) -2 -1 0 1 2at 70.316 kb on + strand, within BACOVA_01661at 70.317 kb on - strand, within BACOVA_01661at 70.333 kb on - strand, within BACOVA_01661at 70.336 kb on + strand, within BACOVA_01661at 70.336 kb on + strand, within BACOVA_01661at 70.337 kb on - strand, within BACOVA_01661at 70.337 kb on - strand, within BACOVA_01661at 70.467 kb on - strand, within BACOVA_01661at 70.507 kb on + strand, within BACOVA_01661at 70.508 kb on - strand, within BACOVA_01661at 70.540 kb on + strand, within BACOVA_01661at 70.685 kb on - strand, within BACOVA_01661at 70.685 kb on - strand, within BACOVA_01661at 70.687 kb on + strand, within BACOVA_01661at 70.687 kb on + strand, within BACOVA_01661at 70.700 kb on - strand, within BACOVA_01661at 70.700 kb on - strand, within BACOVA_01661at 70.710 kb on - strand, within BACOVA_01661at 70.721 kb on + strand, within BACOVA_01661at 70.753 kb on - strand, within BACOVA_01661at 70.755 kb on + strand, within BACOVA_01661at 70.756 kb on - strand, within BACOVA_01661at 70.845 kb on + strand, within BACOVA_01661at 70.873 kb on + strand, within BACOVA_01661at 70.874 kb on - strand, within BACOVA_01661at 70.882 kb on - strand, within BACOVA_01661at 70.882 kb on - strand, within BACOVA_01661at 70.882 kb on - strand, within BACOVA_01661at 70.886 kb on - strand, within BACOVA_01661at 70.886 kb on - strand, within BACOVA_01661at 70.915 kb on - strand, within BACOVA_01661at 71.031 kb on - strand, within BACOVA_01661at 71.135 kb on - strandat 71.135 kb on - strandat 71.136 kb on + strandat 71.137 kb on - strandat 71.138 kb on + strandat 71.138 kb on + strandat 71.139 kb on - strandat 71.143 kb on - strandat 71.156 kb on + strandat 71.173 kb on - strandat 71.173 kb on - strandat 71.178 kb on + strandat 71.201 kb on - strandat 71.291 kb on + strandat 71.332 kb on + strand, within BACOVA_01662at 71.332 kb on + strand, within BACOVA_01662at 71.363 kb on + strand, within BACOVA_01662at 71.461 kb on - strand, within BACOVA_01662at 71.463 kb on - strand, within BACOVA_01662at 71.463 kb on - strand, within BACOVA_01662at 71.506 kb on + strandat 71.527 kb on + strandat 71.527 kb on + strandat 71.528 kb on - strandat 71.595 kb on - strandat 71.691 kb on + strandat 71.692 kb on - strandat 71.692 kb on - strandat 71.717 kb on + strand, within BACOVA_01663at 71.718 kb on - strand, within BACOVA_01663at 71.721 kb on + strand, within BACOVA_01663at 71.722 kb on - strand, within BACOVA_01663at 71.722 kb on - strand, within BACOVA_01663at 71.736 kb on - strand, within BACOVA_01663at 71.762 kb on - strand, within BACOVA_01663at 71.762 kb on - strand, within BACOVA_01663at 71.762 kb on - strand, within BACOVA_01663at 71.792 kb on - strand, within BACOVA_01663at 71.859 kb on + strand, within BACOVA_01663at 71.859 kb on + strand, within BACOVA_01663at 71.860 kb on - strand, within BACOVA_01663at 71.879 kb on + strand, within BACOVA_01663at 71.880 kb on - strand, within BACOVA_01663at 71.889 kb on - strand, within BACOVA_01663at 71.892 kb on + strand, within BACOVA_01663at 71.893 kb on - strand, within BACOVA_01663at 72.029 kb on + strand, within BACOVA_01663at 72.029 kb on + strand, within BACOVA_01663at 72.030 kb on - strand, within BACOVA_01663at 72.044 kb on - strand, within BACOVA_01663at 72.073 kb on + strand, within BACOVA_01663at 72.074 kb on - strand, within BACOVA_01663at 72.081 kb on - strand, within BACOVA_01663at 72.144 kb on + strand, within BACOVA_01663at 72.144 kb on + strand, within BACOVA_01663at 72.248 kb on + strand, within BACOVA_01663at 72.249 kb on - strand, within BACOVA_01663at 72.252 kb on + strand, within BACOVA_01663at 72.253 kb on - strand, within BACOVA_01663at 72.262 kb on + strand, within BACOVA_01663at 72.263 kb on - strand, within BACOVA_01663at 72.282 kb on - strand, within BACOVA_01663at 72.282 kb on - strand, within BACOVA_01663at 72.284 kb on + strand, within BACOVA_01663at 72.307 kb on + strand, within BACOVA_01663at 72.383 kb on - strand, within BACOVA_01663at 72.431 kb on + strand, within BACOVA_01663at 72.467 kb on + strand, within BACOVA_01663at 72.486 kb on + strand, within BACOVA_01663at 72.487 kb on - strand, within BACOVA_01663

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Per-strain Table

Position Strand Gene LocusTag Fraction beta-Cyclodextrin 2.5 mg/mL (C)
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70,316 + BACOVA_01661 0.17 +0.7
70,317 - BACOVA_01661 0.17 +0.1
70,333 - BACOVA_01661 0.19 +1.3
70,336 + BACOVA_01661 0.19 -1.6
70,336 + BACOVA_01661 0.19 -0.5
70,337 - BACOVA_01661 0.19 +0.4
70,337 - BACOVA_01661 0.19 -1.3
70,467 - BACOVA_01661 0.33 +1.9
70,507 + BACOVA_01661 0.37 +0.7
70,508 - BACOVA_01661 0.37 +1.6
70,540 + BACOVA_01661 0.40 +0.4
70,685 - BACOVA_01661 0.55 +0.1
70,685 - BACOVA_01661 0.55 -0.0
70,687 + BACOVA_01661 0.55 -0.9
70,687 + BACOVA_01661 0.55 +1.5
70,700 - BACOVA_01661 0.56 -0.0
70,700 - BACOVA_01661 0.56 -0.4
70,710 - BACOVA_01661 0.57 +1.0
70,721 + BACOVA_01661 0.58 +1.1
70,753 - BACOVA_01661 0.62 -1.4
70,755 + BACOVA_01661 0.62 -1.3
70,756 - BACOVA_01661 0.62 -0.1
70,845 + BACOVA_01661 0.71 -0.6
70,873 + BACOVA_01661 0.74 -1.0
70,874 - BACOVA_01661 0.74 +1.1
70,882 - BACOVA_01661 0.75 -0.6
70,882 - BACOVA_01661 0.75 +1.2
70,882 - BACOVA_01661 0.75 +0.6
70,886 - BACOVA_01661 0.75 -1.2
70,886 - BACOVA_01661 0.75 -0.6
70,915 - BACOVA_01661 0.78 +0.5
71,031 - BACOVA_01661 0.90 -0.3
71,135 - +0.1
71,135 - +1.7
71,136 + -0.9
71,137 - -1.3
71,138 + +0.6
71,138 + +1.3
71,139 - +2.3
71,143 - -1.5
71,156 + +0.1
71,173 - -0.0
71,173 - +0.9
71,178 + +0.1
71,201 - +0.0
71,291 + -1.3
71,332 + BACOVA_01662 0.12 -1.0
71,332 + BACOVA_01662 0.12 -1.4
71,363 + BACOVA_01662 0.29 +1.3
71,461 - BACOVA_01662 0.80 +0.9
71,463 - BACOVA_01662 0.81 +0.2
71,463 - BACOVA_01662 0.81 +0.4
71,506 + +1.8
71,527 + +0.9
71,527 + -0.1
71,528 - -1.5
71,595 - +0.1
71,691 + -0.4
71,692 - +0.7
71,692 - -1.4
71,717 + BACOVA_01663 0.10 +0.7
71,718 - BACOVA_01663 0.11 -0.9
71,721 + BACOVA_01663 0.11 -0.1
71,722 - BACOVA_01663 0.11 -0.6
71,722 - BACOVA_01663 0.11 -1.6
71,736 - BACOVA_01663 0.12 +0.9
71,762 - BACOVA_01663 0.14 -0.7
71,762 - BACOVA_01663 0.14 -1.1
71,762 - BACOVA_01663 0.14 +0.3
71,792 - BACOVA_01663 0.17 -1.8
71,859 + BACOVA_01663 0.22 +0.9
71,859 + BACOVA_01663 0.22 +2.3
71,860 - BACOVA_01663 0.22 -0.5
71,879 + BACOVA_01663 0.24 +0.5
71,880 - BACOVA_01663 0.24 +0.1
71,889 - BACOVA_01663 0.25 -1.0
71,892 + BACOVA_01663 0.25 -0.5
71,893 - BACOVA_01663 0.25 -0.1
72,029 + BACOVA_01663 0.36 +0.9
72,029 + BACOVA_01663 0.36 +0.5
72,030 - BACOVA_01663 0.36 -1.5
72,044 - BACOVA_01663 0.37 +0.4
72,073 + BACOVA_01663 0.40 -1.4
72,074 - BACOVA_01663 0.40 +0.1
72,081 - BACOVA_01663 0.40 +0.2
72,144 + BACOVA_01663 0.45 +1.6
72,144 + BACOVA_01663 0.45 +1.0
72,248 + BACOVA_01663 0.54 +0.2
72,249 - BACOVA_01663 0.54 -0.3
72,252 + BACOVA_01663 0.54 +0.2
72,253 - BACOVA_01663 0.54 +0.2
72,262 + BACOVA_01663 0.55 +0.5
72,263 - BACOVA_01663 0.55 +1.8
72,282 - BACOVA_01663 0.57 -0.6
72,282 - BACOVA_01663 0.57 -0.2
72,284 + BACOVA_01663 0.57 +0.2
72,307 + BACOVA_01663 0.59 -0.1
72,383 - BACOVA_01663 0.65 -0.2
72,431 + BACOVA_01663 0.69 +1.4
72,467 + BACOVA_01663 0.72 -1.1
72,486 + BACOVA_01663 0.73 +0.5
72,487 - BACOVA_01663 0.73 -1.1

Or see this region's nucleotide sequence