Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01090

Experiment: beta-Cyclodextrin 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/mL (C)
299,994	+		BACOVA_01087	0.24	+0.5
299,994	+		BACOVA_01087	0.24	-1.8
299,994	+		BACOVA_01087	0.24	+1.6
300,001	+		BACOVA_01087	0.27	-1.3
300,002	-		BACOVA_01087	0.28	+1.1
300,020	+		BACOVA_01087	0.36	-0.2
300,050	+		BACOVA_01087	0.50	+0.8
300,050	+		BACOVA_01087	0.50	+0.2
300,054	+		BACOVA_01087	0.52	-0.8
300,054	+		BACOVA_01087	0.52	-0.1
300,055	-		BACOVA_01087	0.52	-1.2
300,055	-		BACOVA_01087	0.52	-0.2
300,055	-		BACOVA_01087	0.52	-0.7
300,055	-		BACOVA_01087	0.52	-0.7
300,057	+		BACOVA_01087	0.53	+1.4
300,058	-		BACOVA_01087	0.54	-0.4
300,077	-		BACOVA_01087	0.62	-0.8
300,080	-		BACOVA_01087	0.64	+1.7
300,100	+		BACOVA_01087	0.73	-0.8
300,121	-		BACOVA_01087	0.83	-1.6
300,123	+		BACOVA_01087	0.84	-0.9
300,124	-		BACOVA_01087	0.84	-0.9
300,172	+				-0.0
300,175	-				-0.4
300,176	+				-0.8
300,176	+				+0.3
300,177	-				-0.7
300,236	-				-0.6
300,267	+				+1.0
300,288	+				+0.4
300,288	+				-0.1
300,289	-				-0.1
300,289	-				+0.0
300,307	+				-0.2
300,307	+				-0.4
300,308	-				-0.3
300,311	+				+0.5
300,312	-				+0.9
300,314	+				-0.2
300,315	-				-0.2
300,333	+				-0.6
300,333	+				+0.1
300,334	-				-0.9
300,334	-				-0.6
300,354	+				-0.5
300,355	-				+0.2
300,436	-				-1.2
300,462	-				+0.4
300,463	+				-1.7
300,463	+				-3.4
300,463	+				-0.7
300,467	+				-1.7
300,467	+				-1.5
300,467	+				+0.6
300,468	-				+0.2
300,472	+				+0.7
300,531	+				-2.3
300,532	-				-0.1
300,553	-				+0.6
300,610	-				-0.0
300,612	-				-0.7
300,612	-				+0.1
300,612	-				-0.3
300,615	-				+0.7
300,637	-				+1.4
300,670	-				-0.8
300,689	-				+1.0
300,738	-				-0.6
300,758	-		BACOVA_01089	0.15	-0.7
300,761	-		BACOVA_01089	0.17	+2.0
300,767	+		BACOVA_01089	0.23	-0.1
300,768	-		BACOVA_01089	0.23	+1.9
300,783	+		BACOVA_01089	0.36	+1.4
300,816	+		BACOVA_01089	0.63	-0.3
300,817	-		BACOVA_01089	0.64	+1.3
300,840	-		BACOVA_01089	0.83	+0.9
300,847	-		BACOVA_01089	0.89	-1.7
300,890	-				-1.2
300,892	-				+1.6
300,955	-				+1.0
300,955	-				+0.2
300,957	+				+1.4
300,966	+				+1.0
301,033	+				+0.2
301,094	+		BACOVA_01090	0.14	+2.0
301,105	+		BACOVA_01090	0.15	+1.0
301,126	-		BACOVA_01090	0.18	+0.5
301,126	-		BACOVA_01090	0.18	+1.9
301,204	-		BACOVA_01090	0.27	-1.3
301,205	+		BACOVA_01090	0.27	-0.1
301,206	-		BACOVA_01090	0.27	-1.3
301,206	-		BACOVA_01090	0.27	-0.6
301,213	+		BACOVA_01090	0.28	-0.9
301,222	+		BACOVA_01090	0.29	-0.1
301,223	-		BACOVA_01090	0.29	-0.8
301,250	-		BACOVA_01090	0.32	-1.8
301,261	+		BACOVA_01090	0.33	+0.0
301,262	-		BACOVA_01090	0.33	-0.1
301,289	-		BACOVA_01090	0.36	-1.0
301,339	+		BACOVA_01090	0.42	+0.5
301,360	-		BACOVA_01090	0.44	+0.7
301,360	-		BACOVA_01090	0.44	+0.5
301,360	-		BACOVA_01090	0.44	+0.9
301,360	-		BACOVA_01090	0.44	-1.4
301,379	+		BACOVA_01090	0.46	+0.2
301,463	-		BACOVA_01090	0.56	+0.4
301,496	-		BACOVA_01090	0.60	+0.7
301,505	-		BACOVA_01090	0.61	+0.3
301,540	-		BACOVA_01090	0.65	-0.2
301,559	-		BACOVA_01090	0.67	-0.1
301,607	+		BACOVA_01090	0.72	-0.4
301,608	-		BACOVA_01090	0.72	-0.8
301,633	-		BACOVA_01090	0.75	-0.1
301,639	+		BACOVA_01090	0.76	-0.3
301,640	-		BACOVA_01090	0.76	-0.9
301,660	+		BACOVA_01090	0.78	+0.3
301,660	+		BACOVA_01090	0.78	-0.3
301,662	+		BACOVA_01090	0.79	+0.9
301,734	-		BACOVA_01090	0.87	-0.2
301,734	-		BACOVA_01090	0.87	-0.0
301,735	+		BACOVA_01090	0.87	-0.8
301,735	+		BACOVA_01090	0.87	-1.5
301,736	-		BACOVA_01090	0.87	-0.7
301,779	+				-0.9
301,780	-				+0.6
301,821	-				+1.1
301,848	-				-1.2
301,851	+				-0.6
301,853	+				-0.5
301,854	-				-0.3
301,854	-				-2.0
301,856	+				+0.8
301,857	-				-0.7
301,894	-		BACOVA_01091	0.12	-0.5
301,934	-		BACOVA_01091	0.28	-0.1
301,947	+		BACOVA_01091	0.33	+1.3
301,948	-		BACOVA_01091	0.33	+0.2
301,948	-		BACOVA_01091	0.33	+0.6
301,948	-		BACOVA_01091	0.33	+0.1
301,951	+		BACOVA_01091	0.34	-0.2
301,987	+		BACOVA_01091	0.48	-1.1
301,988	-		BACOVA_01091	0.49	-0.4
301,993	+		BACOVA_01091	0.51	+0.5
302,006	-		BACOVA_01091	0.56	+0.4
302,018	+		BACOVA_01091	0.60	+0.3
302,019	-		BACOVA_01091	0.61	+1.1
302,019	-		BACOVA_01091	0.61	+1.0
302,020	+		BACOVA_01091	0.61	-0.8
302,021	-		BACOVA_01091	0.62	-1.6
302,073	+		BACOVA_01091	0.82	-0.5
302,074	-		BACOVA_01091	0.82	+0.8
302,078	-		BACOVA_01091	0.84	-0.5
302,100	+				+0.0
302,100	+				-0.6
302,101	-				+0.3
302,109	+				-0.2
302,109	+				+0.0
302,130	+				+0.1
302,130	+				-0.1
302,130	+				+0.5
302,131	-				+0.4
302,201	+		BACOVA_01092	0.14	-2.0
302,245	-		BACOVA_01092	0.22	-0.7
302,245	-		BACOVA_01092	0.22	+0.0
302,296	-		BACOVA_01092	0.33	-2.4
302,304	-		BACOVA_01092	0.34	+0.2
302,343	+		BACOVA_01092	0.42	+0.6
302,343	+		BACOVA_01092	0.42	+0.3
302,397	+		BACOVA_01092	0.52	+0.3
302,403	-		BACOVA_01092	0.54	-1.0
302,404	-		BACOVA_01092	0.54	-1.1
302,404	-		BACOVA_01092	0.54	+1.4
302,415	+		BACOVA_01092	0.56	-0.4
302,415	+		BACOVA_01092	0.56	-0.6
302,416	-		BACOVA_01092	0.56	-0.9
302,440	-		BACOVA_01092	0.61	-0.8
302,485	-		BACOVA_01092	0.70	-0.8
302,571	+		BACOVA_01092	0.87	+0.2
302,592	+				-1.9
302,670	+				+0.7
302,671	-				-0.2
302,707	-				-0.6
302,707	-				+0.1
302,727	-				-0.1
302,751	-				+1.3
302,843	+				-0.6
302,844	-				-0.6