Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02485

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02484 and MPMX26_02485 are separated by 167 nucleotidesMPMX26_02485 and MPMX26_02486 are separated by 87 nucleotidesMPMX26_02486 and MPMX26_02487 are separated by 26 nucleotides MPMX26_02484: MPMX26_02484 - NADPH dehydrogenase, at 2,570,515 to 2,571,636 _02484 MPMX26_02485: MPMX26_02485 - Putative 3-methyladenine DNA glycosylase, at 2,571,804 to 2,572,370 _02485 MPMX26_02486: MPMX26_02486 - Formamidopyrimidine-DNA glycosylase, at 2,572,458 to 2,573,276 _02486 MPMX26_02487: MPMX26_02487 - Peptidyl-prolyl cis-trans isomerase C, at 2,573,303 to 2,573,587 _02487 Position (kb) 2571 2572 2573Strain fitness (log2 ratio) -1 0 1 2at 2570.839 kb on - strand, within MPMX26_02484at 2570.839 kb on - strand, within MPMX26_02484at 2570.851 kb on - strand, within MPMX26_02484at 2570.871 kb on - strand, within MPMX26_02484at 2570.871 kb on - strand, within MPMX26_02484at 2570.871 kb on - strand, within MPMX26_02484at 2570.871 kb on - strand, within MPMX26_02484at 2570.871 kb on - strand, within MPMX26_02484at 2570.878 kb on - strand, within MPMX26_02484at 2570.893 kb on - strand, within MPMX26_02484at 2570.926 kb on - strand, within MPMX26_02484at 2570.970 kb on - strand, within MPMX26_02484at 2571.003 kb on - strand, within MPMX26_02484at 2571.024 kb on - strand, within MPMX26_02484at 2571.049 kb on - strand, within MPMX26_02484at 2571.051 kb on + strand, within MPMX26_02484at 2571.096 kb on - strand, within MPMX26_02484at 2571.096 kb on - strand, within MPMX26_02484at 2571.106 kb on - strand, within MPMX26_02484at 2571.112 kb on - strand, within MPMX26_02484at 2571.147 kb on - strand, within MPMX26_02484at 2571.201 kb on - strand, within MPMX26_02484at 2571.208 kb on - strand, within MPMX26_02484at 2571.208 kb on - strand, within MPMX26_02484at 2571.210 kb on - strand, within MPMX26_02484at 2571.219 kb on - strand, within MPMX26_02484at 2571.231 kb on - strand, within MPMX26_02484at 2571.282 kb on - strand, within MPMX26_02484at 2571.293 kb on - strand, within MPMX26_02484at 2571.298 kb on - strand, within MPMX26_02484at 2571.313 kb on - strand, within MPMX26_02484at 2571.381 kb on - strand, within MPMX26_02484at 2571.391 kb on - strand, within MPMX26_02484at 2571.396 kb on - strand, within MPMX26_02484at 2571.408 kb on - strand, within MPMX26_02484at 2571.408 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.426 kb on - strand, within MPMX26_02484at 2571.451 kb on - strand, within MPMX26_02484at 2571.459 kb on - strand, within MPMX26_02484at 2571.493 kb on - strand, within MPMX26_02484at 2571.493 kb on - strand, within MPMX26_02484at 2571.493 kb on - strand, within MPMX26_02484at 2571.493 kb on - strand, within MPMX26_02484at 2571.493 kb on - strand, within MPMX26_02484at 2571.519 kb on - strand, within MPMX26_02484at 2571.519 kb on - strand, within MPMX26_02484at 2571.519 kb on - strand, within MPMX26_02484at 2571.519 kb on - strand, within MPMX26_02484at 2571.541 kb on - strandat 2571.546 kb on - strandat 2571.546 kb on - strandat 2571.546 kb on - strandat 2572.227 kb on + strand, within MPMX26_02485at 2572.485 kb on + strandat 2572.497 kb on + strandat 2572.530 kb on + strandat 2572.530 kb on + strandat 2572.530 kb on + strandat 2572.584 kb on + strand, within MPMX26_02486at 2572.640 kb on + strand, within MPMX26_02486at 2572.694 kb on + strand, within MPMX26_02486at 2572.760 kb on + strand, within MPMX26_02486at 2572.765 kb on + strand, within MPMX26_02486at 2572.765 kb on + strand, within MPMX26_02486at 2572.765 kb on + strand, within MPMX26_02486at 2572.835 kb on + strand, within MPMX26_02486at 2572.835 kb on + strand, within MPMX26_02486at 2572.835 kb on + strand, within MPMX26_02486at 2572.869 kb on + strand, within MPMX26_02486at 2572.904 kb on + strand, within MPMX26_02486at 2572.968 kb on + strand, within MPMX26_02486at 2572.977 kb on + strand, within MPMX26_02486at 2573.023 kb on + strand, within MPMX26_02486at 2573.149 kb on + strand, within MPMX26_02486at 2573.151 kb on + strand, within MPMX26_02486at 2573.172 kb on + strand, within MPMX26_02486at 2573.215 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,570,839 - MPMX26_02484 0.29 -0.7
2,570,839 - MPMX26_02484 0.29 -0.3
2,570,851 - MPMX26_02484 0.30 +0.5
2,570,871 - MPMX26_02484 0.32 -0.6
2,570,871 - MPMX26_02484 0.32 +0.2
2,570,871 - MPMX26_02484 0.32 +0.4
2,570,871 - MPMX26_02484 0.32 +0.9
2,570,871 - MPMX26_02484 0.32 -0.1
2,570,878 - MPMX26_02484 0.32 +0.1
2,570,893 - MPMX26_02484 0.34 -0.8
2,570,926 - MPMX26_02484 0.37 +0.7
2,570,970 - MPMX26_02484 0.41 +0.1
2,571,003 - MPMX26_02484 0.43 +0.6
2,571,024 - MPMX26_02484 0.45 -0.9
2,571,049 - MPMX26_02484 0.48 +0.2
2,571,051 + MPMX26_02484 0.48 +1.2
2,571,096 - MPMX26_02484 0.52 +0.0
2,571,096 - MPMX26_02484 0.52 -0.4
2,571,106 - MPMX26_02484 0.53 +1.4
2,571,112 - MPMX26_02484 0.53 -0.4
2,571,147 - MPMX26_02484 0.56 +0.2
2,571,201 - MPMX26_02484 0.61 -1.3
2,571,208 - MPMX26_02484 0.62 +1.2
2,571,208 - MPMX26_02484 0.62 -1.3
2,571,210 - MPMX26_02484 0.62 -0.3
2,571,219 - MPMX26_02484 0.63 +0.9
2,571,231 - MPMX26_02484 0.64 -0.9
2,571,282 - MPMX26_02484 0.68 +0.3
2,571,293 - MPMX26_02484 0.69 -1.0
2,571,298 - MPMX26_02484 0.70 -0.1
2,571,313 - MPMX26_02484 0.71 +0.8
2,571,381 - MPMX26_02484 0.77 -0.8
2,571,391 - MPMX26_02484 0.78 +0.5
2,571,396 - MPMX26_02484 0.79 -0.4
2,571,408 - MPMX26_02484 0.80 +0.6
2,571,408 - MPMX26_02484 0.80 +0.5
2,571,426 - MPMX26_02484 0.81 -0.9
2,571,426 - MPMX26_02484 0.81 -0.5
2,571,426 - MPMX26_02484 0.81 +0.2
2,571,426 - MPMX26_02484 0.81 -0.5
2,571,426 - MPMX26_02484 0.81 -0.1
2,571,426 - MPMX26_02484 0.81 -0.9
2,571,451 - MPMX26_02484 0.83 -0.5
2,571,459 - MPMX26_02484 0.84 -0.4
2,571,493 - MPMX26_02484 0.87 -0.5
2,571,493 - MPMX26_02484 0.87 -0.6
2,571,493 - MPMX26_02484 0.87 -1.0
2,571,493 - MPMX26_02484 0.87 +0.7
2,571,493 - MPMX26_02484 0.87 +0.2
2,571,519 - MPMX26_02484 0.89 +0.2
2,571,519 - MPMX26_02484 0.89 -0.4
2,571,519 - MPMX26_02484 0.89 +1.0
2,571,519 - MPMX26_02484 0.89 -0.2
2,571,541 - -0.1
2,571,546 - +0.3
2,571,546 - +0.5
2,571,546 - +0.1
2,572,227 + MPMX26_02485 0.75 +0.5
2,572,485 + -0.1
2,572,497 + +0.2
2,572,530 + -0.9
2,572,530 + +0.4
2,572,530 + -0.5
2,572,584 + MPMX26_02486 0.15 +0.1
2,572,640 + MPMX26_02486 0.22 -0.8
2,572,694 + MPMX26_02486 0.29 -1.3
2,572,760 + MPMX26_02486 0.37 -0.2
2,572,765 + MPMX26_02486 0.37 -0.6
2,572,765 + MPMX26_02486 0.37 +2.3
2,572,765 + MPMX26_02486 0.37 -0.5
2,572,835 + MPMX26_02486 0.46 -0.4
2,572,835 + MPMX26_02486 0.46 +0.3
2,572,835 + MPMX26_02486 0.46 +0.3
2,572,869 + MPMX26_02486 0.50 -0.1
2,572,904 + MPMX26_02486 0.54 -0.3
2,572,968 + MPMX26_02486 0.62 +0.0
2,572,977 + MPMX26_02486 0.63 +0.7
2,573,023 + MPMX26_02486 0.69 -0.2
2,573,149 + MPMX26_02486 0.84 -0.1
2,573,151 + MPMX26_02486 0.85 +0.3
2,573,172 + MPMX26_02486 0.87 -0.3
2,573,215 + +1.7

Or see this region's nucleotide sequence