Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02390

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02389 and MPMX26_02390 overlap by 17 nucleotidesMPMX26_02390 and MPMX26_02391 overlap by 23 nucleotides MPMX26_02389: MPMX26_02389 - hypothetical protein, at 2,472,891 to 2,473,796 _02389 MPMX26_02390: MPMX26_02390 - hypothetical protein, at 2,473,780 to 2,474,790 _02390 MPMX26_02391: MPMX26_02391 - Prophage integrase IntS, at 2,474,768 to 2,475,232 _02391 Position (kb) 2473 2474 2475Strain fitness (log2 ratio) -3 -2 -1 0 1at 2473.804 kb on - strandat 2474.420 kb on + strand, within MPMX26_02390at 2474.428 kb on - strand, within MPMX26_02390at 2475.364 kb on - strandat 2475.364 kb on - strandat 2475.364 kb on - strandat 2475.445 kb on - strandat 2475.456 kb on - strandat 2475.469 kb on - strandat 2475.474 kb on - strandat 2475.567 kb on - strandat 2475.567 kb on - strandat 2475.579 kb on - strandat 2475.579 kb on - strandat 2475.584 kb on - strandat 2475.763 kb on - strandat 2475.769 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,473,804 - +0.1
2,474,420 + MPMX26_02390 0.63 +0.2
2,474,428 - MPMX26_02390 0.64 +0.7
2,475,364 - -0.1
2,475,364 - -0.5
2,475,364 - -0.5
2,475,445 - -2.7
2,475,456 - -3.7
2,475,469 - -2.9
2,475,474 - -0.3
2,475,567 - -1.1
2,475,567 - -1.9
2,475,579 - -0.5
2,475,579 - -0.1
2,475,584 - -2.0
2,475,763 - -3.2
2,475,769 - -1.4

Or see this region's nucleotide sequence