Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02221

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02220 and MPMX26_02221 are separated by 18 nucleotidesMPMX26_02221 and MPMX26_02222 overlap by 1 nucleotides MPMX26_02220: MPMX26_02220 - hypothetical protein, at 2,276,635 to 2,278,143 _02220 MPMX26_02221: MPMX26_02221 - Colistin resistance protein EmrA, at 2,278,162 to 2,279,292 _02221 MPMX26_02222: MPMX26_02222 - hypothetical protein, at 2,279,292 to 2,280,422 _02222 Position (kb) 2278 2279 2280Strain fitness (log2 ratio) -1 0 1 2at 2277.167 kb on + strand, within MPMX26_02220at 2277.388 kb on + strand, within MPMX26_02220at 2277.502 kb on + strand, within MPMX26_02220at 2277.502 kb on + strand, within MPMX26_02220at 2277.595 kb on + strand, within MPMX26_02220at 2277.616 kb on + strand, within MPMX26_02220at 2277.646 kb on + strand, within MPMX26_02220at 2277.685 kb on + strand, within MPMX26_02220at 2277.685 kb on + strand, within MPMX26_02220at 2277.795 kb on + strand, within MPMX26_02220at 2277.852 kb on + strand, within MPMX26_02220at 2277.994 kb on + strandat 2278.071 kb on + strandat 2278.071 kb on + strandat 2278.582 kb on + strand, within MPMX26_02221at 2278.752 kb on + strand, within MPMX26_02221at 2278.752 kb on + strand, within MPMX26_02221at 2278.762 kb on + strand, within MPMX26_02221at 2278.863 kb on + strand, within MPMX26_02221at 2278.947 kb on + strand, within MPMX26_02221at 2279.050 kb on + strand, within MPMX26_02221at 2280.291 kb on + strand, within MPMX26_02222

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,277,167 + MPMX26_02220 0.35 -0.9
2,277,388 + MPMX26_02220 0.50 +1.8
2,277,502 + MPMX26_02220 0.57 -0.4
2,277,502 + MPMX26_02220 0.57 -0.2
2,277,595 + MPMX26_02220 0.64 +0.8
2,277,616 + MPMX26_02220 0.65 -0.0
2,277,646 + MPMX26_02220 0.67 -0.1
2,277,685 + MPMX26_02220 0.70 -0.7
2,277,685 + MPMX26_02220 0.70 +0.3
2,277,795 + MPMX26_02220 0.77 -1.0
2,277,852 + MPMX26_02220 0.81 -0.9
2,277,994 + +1.0
2,278,071 + -0.2
2,278,071 + -1.1
2,278,582 + MPMX26_02221 0.37 +0.6
2,278,752 + MPMX26_02221 0.52 -0.9
2,278,752 + MPMX26_02221 0.52 +2.2
2,278,762 + MPMX26_02221 0.53 +1.0
2,278,863 + MPMX26_02221 0.62 -1.4
2,278,947 + MPMX26_02221 0.69 +1.2
2,279,050 + MPMX26_02221 0.79 +0.7
2,280,291 + MPMX26_02222 0.88 +0.6

Or see this region's nucleotide sequence