Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02043

Experiment: L-tyrosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02042 and MPMX26_02043 are separated by 164 nucleotidesMPMX26_02043 and MPMX26_02044 are separated by 57 nucleotides MPMX26_02042: MPMX26_02042 - Alkyl hydroperoxide reductase subunit F, at 2,108,357 to 2,109,922 _02042 MPMX26_02043: MPMX26_02043 - hypothetical protein, at 2,110,087 to 2,111,007 _02043 MPMX26_02044: MPMX26_02044 - TelA-like protein, at 2,111,065 to 2,112,195 _02044 Position (kb) 2110 2111 2112Strain fitness (log2 ratio) -1 0 1at 2109.259 kb on - strand, within MPMX26_02042at 2109.259 kb on - strand, within MPMX26_02042at 2109.259 kb on - strand, within MPMX26_02042at 2109.736 kb on - strand, within MPMX26_02042at 2109.752 kb on - strand, within MPMX26_02042at 2110.306 kb on - strand, within MPMX26_02043at 2110.500 kb on - strand, within MPMX26_02043at 2110.500 kb on - strand, within MPMX26_02043at 2110.500 kb on - strand, within MPMX26_02043at 2110.923 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (C)
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2,109,259 - MPMX26_02042 0.58 +0.2
2,109,259 - MPMX26_02042 0.58 +0.2
2,109,259 - MPMX26_02042 0.58 +0.7
2,109,736 - MPMX26_02042 0.88 +0.2
2,109,752 - MPMX26_02042 0.89 +0.3
2,110,306 - MPMX26_02043 0.24 +0.1
2,110,500 - MPMX26_02043 0.45 -0.1
2,110,500 - MPMX26_02043 0.45 -0.7
2,110,500 - MPMX26_02043 0.45 +0.2
2,110,923 - +1.0

Or see this region's nucleotide sequence